EVA: Detailed information for proteins added on: 2000_12_06

Note

not all PDB files correspond to a prediction. Instead, predictions are restricted by the following criteria:

Ab initio prediction:
no protein with significant sequence similarity to a PDB protein already known is listed.
Comparative modelling:
ONLY proteins with significant sequence similarity to known PDB proteins are listed.
Threading:
ONLY proteins which are structurally similar to known PDB proteins are listed
jump to notations used

date	id	chains	PDB ASCII	DSSP ASCII	FASTA ASCII	PSI-Blast ASCII	PSI-Blast HTML	DSSP header	DSSP compnd	DSSP source	DSSP author
2000_12_06	1ci6	A-B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSCRIPTION	MOLECULE: TRANSCRIPTION FACTOR ATF-4; CHAIN: A; ENGINEERED: YES; MOLECULE: TRANSCRIPTION FACTOR C/EBP BETA; CHAIN: B; ENGINEERED: YES	HOMO SAPIENS; HUMAN; MUS MUSCULUS; MOUSE;	L.M.PODUST,Y.KIM
2000_12_06	1d2t	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	MOLECULE: ACID PHOSPHATASE; CHAIN: A; FRAGMENT: ACID PHOSPHATASE; EC: 3.1.3.2; ENGINEERED: YES	ESCHERICHIA BLATTAE; BACTERIA;	K.ISHIKAWA,Y.MIHARA,K.GONDOH,E.SUZUKI,Y.ASANO
2000_12_06	1e2x	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSCRIPTIONAL REGULATION	MOLECULE: FATTY ACID METABOLISM REGULATOR PROTEIN; CHAIN: A; FRAGMENT: FULL LENGTH; ENGINEERED: YES	ESCHERICHIA COLI;	D.M.F.VAN AALTEN,C.DIRUSSO,J.KNUDSEN,R.K.WIERENGA
2000_12_06	1edz	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXIDOREDUCTASE	MOLECULE: 5,10-METHYLENETETRAHYDROFOLATE DEHYDROGENASE; CHAIN: A; EC: 1.5.1.15; ENGINEERED: YES; OTHER_DETAILS: NAD+ DEPENDENT	SACCHAROMYCES CEREVISIAE; YEAST;	A.F.MONZINGO,A.BREKSA,S.ERNST,D.R.APPLING,J.D.ROBERTUS
2000_12_06	1fr3	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	METAL BINDING PROTEIN	MOLECULE: MOLYBDATE/TUNGSTATE BINDING PROTEIN; CHAIN: A, B, C, D, E, F, G, H, I, J, K, L; SYNONYM: MOP	SPOROMUSA OVATA; BACTERIA	U.G.WAGNER,E.STUPPERICH,C.KRATKY
2000_12_06	1fx3	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSPORT PROTEIN	MOLECULE: PROTEIN-EXPORT PROTEIN SECB; CHAIN: A, B, C, D; SYNONYM: SECB; ENGINEERED: YES	HAEMOPHILUS INFLUENZAE; BACTERIA;	Z.XU,J.D.KNAFELS,K.YOSHINO
2000_12_06	1fxk	B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	CHAPERONE	MOLECULE: PREFOLDIN; CHAIN: A; ENGINEERED: YES; MOLECULE: PREFOLDIN; CHAIN: B; ENGINEERED: YES; MOLECULE: PREFOLDIN; CHAIN: C; ENGINEERED: YES	METHANOBACTERIUM THERMOAUTOTROPHICUM; ARCHAEA; METHANOBACTERIUM THERMOAUTOTROPHICUM; ARCHAEA; METHANOBACTERIUM THERMOAUTOTROPHICUM; ARCHAEA;	R.SIEGERT,C.SCHEUFLER,I.MOAREFI
2000_12_06	1fxx	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	MOLECULE: EXONUCLEASE I; CHAIN: A; SYNONYM: EXODEOXYRIBONUCLEASE I; EC: 3.1.11.1; ENGINEERED: YES	ESCHERICHIA COLI; BACTERIA;	W.A.BREYER,B.W.MATTHEWS
2000_12_06	1g7t	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSLATION	MOLECULE: TRANSLATION INITIATION FACTOR IF2/EIF5B; CHAIN: A; ENGINEERED: YES	METHANOBACTERIUM THERMOAUTOTROPHICUM; ARCHAEA;	A.ROLL-MECAK,C.CAO,T.E.DEVER,S.K.BURLEY
2000_12_06	1ggx	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LUMINESCENT PROTEIN	MOLECULE: FLUORESCENT PROTEIN FP583; CHAIN: A, B, C, D; SYNONYM: RFP; ENGINEERED: YES; OTHER_DETAILS: RESIDUE CRQ 68 IS MADE FROM RESIDUES GLN 66, TYR 67 AND GLY 68.	DISCOSOMA SP.; CORAL;	M.A.WALL,M.A.SOCOLICH,R.RANGANATHAN

Notations used

date	date of weekly update
id	PDB identifier of protein
chains	PDB chain identifiers of protein (contains links only to sequence unique chains)
PDB ASCII	ASCII (plain text) version of raw PDB file
DSSP ASCII	ASCII (plain text) version of raw DSSP file, i.e. assignment of secondary structure and solvent accessibility for PDB
FASTA ASCII	ASCII version of PDB sequence in FASTA format
PSI-Blast HTML	gzipped version of PSI-BLAST in HTML from MVIEW. WATCH it files may be VERY large!) size of file in brackets)
PSI-Blast ASCII	gzipped version of PSI-BLAST in ASCII (size of file in brackets)
DSSP header	DSSP 'HEADER' field
DSSP compnd	DSSP 'COMPND' field
DSSP source	DSSP 'SOURCE' field
DSSP author	DSSP 'AUTHOR' field