EVA: Detailed information for proteins added on: 2000_08_09

not all PDB files correspond to a prediction. Instead, predictions are restricted by the following criteria:

Ab initio prediction:
no protein with significant sequence similarity to a PDB protein already known is listed.
Comparative modelling:
ONLY proteins with significant sequence similarity to known PDB proteins are listed.
Threading:
ONLY proteins which are structurally similar to known PDB proteins are listed
jump to notations used

date	id	chains	PDB ASCII	DSSP ASCII	FASTA ASCII	PSI-Blast ASCII	PSI-Blast HTML	DSSP header	DSSP compnd	DSSP source	DSSP author
2000_08_09	1de6	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	ISOMERASE	MOLECULE: L-RHAMNOSE ISOMERASE; CHAIN: A, B, C, D; EC: 5.3.1.14; ENGINEERED: YES	ESCHERICHIA COLI; BACTERIA;	I.P.KORNDORFER,W.D.FESSNER,B.W.MATTHEWS
2000_08_09	1emw	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	RIBOSOME	MOLECULE: S16 RIBOSOMAL PROTEIN; CHAIN: A; ENGINEERED: YES	THERMUS THERMOPHILUS; BACTERIA;	P.ALLARD,A.V.RAK,B.T.WIMBERLY,W.M.CLEMONS JR.,A.KALININ, M.HELGSTRAND,M.B.GARBER,V.RAMAKRISHNAN,T.HARD
2000_08_09	1ew4	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	UNKNOWN FUNCTION	MOLECULE: CYAY PROTEIN; CHAIN: A; ENGINEERED: YES	ESCHERICHIA COLI; BACTERIA;	S.W.SUH,S.CHO,M.G.LEE,J.K.YANG,J.Y.LEE,H.K.SONG
2000_08_09	1ezg	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	ANTIFREEZE PROTEIN	MOLECULE: THERMAL HYSTERESIS PROTEIN ISOFORM YL-1; CHAIN: A, B; ENGINEERED: YES	TENEBRIO MOLITOR; YELLOW MEALWORM; GENE: CDNA FROM FAT BODY LIBRARY; OTHER_DETAILS: LARVAE HEMOLYMPH	Y.-C.LIOU,A.TOCILJ,P.L.DAVIES,Z.JIA
2000_08_09	1qkr	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	ACTIN CYTOSKELETON	MOLECULE: VINCULIN; CHAIN: A, B; FRAGMENT: C-TERMINAL DOMAIN; SYNONYM: TAIL DOMAIN; ENGINEERED: YES	GALLUS GALLUS; CHICKEN; TISSUE: MUSCLE; GENE: VCL;	C.BAKOLITSA,J.M.DE PEREDA,C.R.BAGSHAW,D.R.CRITCHLEY, R.C.LIDDINGTON

date	date of weekly update
id	PDB identifier of protein
chains	PDB chain identifiers of protein (contains links only to sequence unique chains)
PDB ASCII	ASCII (plain text) version of raw PDB file
DSSP ASCII	ASCII (plain text) version of raw DSSP file, i.e. assignment of secondary structure and solvent accessibility for PDB
FASTA ASCII	ASCII version of PDB sequence in FASTA format
PSI-Blast HTML	gzipped version of PSI-BLAST in HTML from MVIEW. WATCH it files may be VERY large!) size of file in brackets)
PSI-Blast ASCII	gzipped version of PSI-BLAST in ASCII (size of file in brackets)
DSSP header	DSSP 'HEADER' field
DSSP compnd	DSSP 'COMPND' field
DSSP source	DSSP 'SOURCE' field
DSSP author	DSSP 'AUTHOR' field