EVA: Detailed information for proteins added on: 2000_07_26

Note

not all PDB files correspond to a prediction. Instead, predictions are restricted by the following criteria:

Ab initio prediction:
no protein with significant sequence similarity to a PDB protein already known is listed.
Comparative modelling:
ONLY proteins with significant sequence similarity to known PDB proteins are listed.
Threading:
ONLY proteins which are structurally similar to known PDB proteins are listed
jump to notations used

date	id	chains	PDB ASCII	DSSP ASCII	FASTA ASCII	PSI-Blast ASCII	PSI-Blast HTML	DSSP header	DSSP compnd	DSSP source	DSSP author
2000_07_26	1c7n	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: CYSTALYSIN; CHAIN: A, B, C, D, E, F, G, H; ENGINEERED: YES	TREPONEMA DENTICOLA; BACTERIA;	H.I.KRUPKA,R.HUBER,S.C.HOLT,T.CLAUSEN
2000_07_26	1dqp	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: GUANINE PHOSPHORIBOSYLTRANSFERASE; CHAIN: A, B; EC: 2.4.2.8; ENGINEERED: YES	GIARDIA LAMBLIA;	W.SHI,N.R.MUNAGALA,C.C.WANG,C.M.LI,P.C.TYLER,R.H.FURNEAUX, C.GRUBMEYER,V.L.SCHRAMM,S.C.ALMO
2000_07_26	1ds9	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	CONTRACTILE PROTEIN	MOLECULE: OUTER ARM DYNEIN; CHAIN: A; FRAGMENT: LIGHT CHAIN 1; ENGINEERED: YES	CHLAMYDOMONAS REINHARDTII; GREEN ALGAE; ORGAN: FLAGELLAE;	H.W.WU,M.W.MACIEJEWSKI,A.MARINTCHEV,S.E.BENASHSKI, G.P.MULLEN,S.M.KING
2000_07_26	1exk	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	CHAPERONE	MOLECULE: DNAJ PROTEIN; CHAIN: A; FRAGMENT: RESIDUES 131-209; ENGINEERED: YES	ESCHERICHIA COLI; BACTERIA; OTHER_DETAILS: SYNTHETIC GENE BASED ON E. COLI DNAJ CRD SEQUENCE	M.MARTINEZ-YAMOUT,G.B.LEGGE,O.ZHANG,P.E.WRIGHT,H.J.DYSON
2000_07_26	1f0j	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	MOLECULE: PHOSPHODIESTERASE 4B; CHAIN: A, B; FRAGMENT: CATALYTIC DOMAIN; SYNONYM: PDE4B; EC: 3.1.4.17; ENGINEERED: YES; MUTATION: YES	HOMO SAPIENS; HUMAN; CELL_LINE: MONOCYTE;	R.X.XU,A.M.HASSELL,D.VANDERWALL,M.H.LAMBERT,W.D.HOLMES, M.A.LUTHER,W.J.ROCQUE,M.V.MILBURN,Y.ZHAO,H.KE,R.T.NOLTE
2000_07_26	1f43	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSCRIPTION	MOLECULE: MATING-TYPE PROTEIN A-1; CHAIN: A; FRAGMENT: HOMEODOMAIN, C-TERMINAL DOMAIN (66-126); ENGINEERED: YES	SACCHAROMYCES CEREVISIAE; YEAST;	J.S.ANDERSON,M.FORMAN,S.MODLESKI,F.W.DAHLQUIST,S.M.BAXTER
2000_07_26	1f8x	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: NUCLEOSIDE 2-DEOXYRIBOSYLTRANSFERASE; CHAIN: A, B; EC: 2.4.2.6	LACTOBACILLUS LEICHMANNII; BACTERIA	S.R.ARMSTRONG,W.J.COOK,S.A.SHORT,S.E.EALICK
2000_07_26	1fao	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	SIGNALING PROTEIN	MOLECULE: DUAL ADAPTOR OF PHOSPHOTYROSINE AND 3- PHOSPHOINOSITIDES; CHAIN: A; FRAGMENT: PLECKSTRIN HOMOLOGY DOMAIN; SYNONYM: DAPP1, PHISH, BAM32; ENGINEERED: YES; OTHER_DETAILS: COMPLEX WITH INOSITOL 1,3,4,5- TETRAKISPHOSPHATE	HOMO SAPIENS; HUMAN;	K.M.FERGUSON,J.M.KAVRAN,V.G.SANKARAN,E.FOURNIER,S.J.ISAKOFF, E.Y.SKOLNIK,M.A.LEMMON

Notations used

date	date of weekly update
id	PDB identifier of protein
chains	PDB chain identifiers of protein (contains links only to sequence unique chains)
PDB ASCII	ASCII (plain text) version of raw PDB file
DSSP ASCII	ASCII (plain text) version of raw DSSP file, i.e. assignment of secondary structure and solvent accessibility for PDB
FASTA ASCII	ASCII version of PDB sequence in FASTA format
PSI-Blast HTML	gzipped version of PSI-BLAST in HTML from MVIEW. WATCH it files may be VERY large!) size of file in brackets)
PSI-Blast ASCII	gzipped version of PSI-BLAST in ASCII (size of file in brackets)
DSSP header	DSSP 'HEADER' field
DSSP compnd	DSSP 'COMPND' field
DSSP source	DSSP 'SOURCE' field
DSSP author	DSSP 'AUTHOR' field