EVA: Detailed information for proteins added on: 2000_05_31

Note

not all PDB files correspond to a prediction. Instead, predictions are restricted by the following criteria:

 

date id chains PDB ASCII DSSP ASCII FASTA ASCII PSI-Blast ASCII PSI-Blast HTMLDSSP headerDSSP compndDSSP sourceDSSP author
2000_05_311dj0 Apdb_asciidssp fasta psi_asciipsi_html LYASEMOLECULE: PSEUDOURIDINE SYNTHASE I; CHAIN: A, B; EC: 4.2.1.70; ENGINEERED: YESESCHERICHIA COLI; BACTERIA;P.G.FOSTER,L.HUANG,D.V.SANTI,R.M.STROUD
2000_05_311dlj Apdb_asciidssp fasta psi_asciipsi_html OXIDOREDUCTASEMOLECULE: UDP-GLUCOSE DEHYDROGENASE; CHAIN: A; EC: 1.1.1.22; ENGINEERED: YES; MUTATION: YESSTREPTOCOCCUS PYOGENES; BACTERIA;R.E.CAMPBELL,S.C.MOSIMANN,I.VAN DE RIJN,M.E.TANNER, N.C.J.STRYNADKA
2000_05_311du2 Apdb_asciidssp fasta psi_asciipsi_html TRANSFERASEMOLECULE: DNA POLYMERASE III; CHAIN: A; FRAGMENT: THETA SUBUNIT; EC: 2.7.7.7; ENGINEERED: YESESCHERICHIA COLI; BACTERIA;M.A.KENIRY,H.A.BERTHON,J.-Y.YANG,C.S.MILES,N.E.DIXON
2000_05_311ej3 Apdb_asciidssp fasta psi_asciipsi_html OXIDOREDUCTASEMOLECULE: AEQUORIN; CHAIN: A, B; ENGINEERED: YESAEQUOREA AEQUOREA; JELLYFISH; ORGAN: LIGHT ORGAN;J.F.HEAD,S.INOUYE,K.TERANISHI,O.SHIMOMURA
2000_05_311eq6Apdb_asciidssp fasta psi_asciipsi_html PROTEIN TRANSPORTMOLECULE: MOG1P; CHAIN: A; FRAGMENT: RESIDUES 30-218; ENGINEERED: YESSACCHAROMYCES CEREVISIAE; YEAST;M.STEWART,R.P.BAKER

Notations used

date date of weekly update
id PDB identifier of protein
chains PDB chain identifiers of protein (contains links only to sequence unique chains)
PDB ASCII ASCII (plain text) version of raw PDB file
DSSP ASCII ASCII (plain text) version of raw DSSP file, i.e. assignment of secondary structure and solvent accessibility for PDB
FASTA ASCII ASCII version of PDB sequence in FASTA format
PSI-Blast HTML gzipped version of PSI-BLAST in HTML from MVIEW. WATCH it files may be VERY large!) size of file in brackets)
PSI-Blast ASCII gzipped version of PSI-BLAST in ASCII (size of file in brackets)
DSSP header DSSP 'HEADER' field
DSSP compnd DSSP 'COMPND' field
DSSP source DSSP 'SOURCE' field
DSSP author DSSP 'AUTHOR' field