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EVA fr results for: SAMt99

Organisation of method specific results

 
 
METHOD about: ../../doc/explain_methods.html#PX_about_samt99
METHOD url: SAMt99
METHOD quote: K Karplus, C Barrett, and R Hughey:: Hidden Markov Models for Detecting Remote Protein Homologies, Bioinformatics, 14, 846-856, 1999
TYPE : fr
NPROT : 220
NWEEKS : 137
NOTE 1 : here ALL results obtained for samt99 are given, i.e. NOT those for a common subset!
NOTE 2 : all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure!



Averages over all proteins
type date Target -lnP_MMT Z_CE Q_LG1 Q_LG2 N3.5A_Gbl% N5A_Gbl% ModN% ServScore N3.5A_ext_CE% N5A_ext_CE% TgtN
fr2004_03_05psum5.52.73.76.522.327.859.4116.334.538.8203.3




Averages over each month
GeneralBestof 1 hitsBestof 5 hits
TypeMethodMonthNprotN3.5A_Gbl%>File with details NprotN3.5A_Gbl%>File with details
frsamt99ALL 220 22.4   220 25.8  
frsamt992000_09 4 3.7 old/2000_09_samt99_bestof1.html 4 6.7 old/2000_09_samt99_bestof5.html
frsamt992000_10 2 1.1 old/2000_10_samt99_bestof1.html 2 1.1 old/2000_10_samt99_bestof5.html
frsamt992000_11 5 30.7 old/2000_11_samt99_bestof1.html 5 40.5 old/2000_11_samt99_bestof5.html
frsamt992000_12 7 45.8 old/2000_12_samt99_bestof1.html 7 50.0 old/2000_12_samt99_bestof5.html
frsamt992001_01 8 20.3 old/2001_01_samt99_bestof1.html 8 22.7 old/2001_01_samt99_bestof5.html
frsamt992001_02 6 15.0 old/2001_02_samt99_bestof1.html 6 16.0 old/2001_02_samt99_bestof5.html
frsamt992001_03 14 17.2 old/2001_03_samt99_bestof1.html 14 19.3 old/2001_03_samt99_bestof5.html
frsamt992001_04 6 7.9 old/2001_04_samt99_bestof1.html 6 7.9 old/2001_04_samt99_bestof5.html
frsamt992001_05 10 17.3 old/2001_05_samt99_bestof1.html 10 20.9 old/2001_05_samt99_bestof5.html
frsamt992001_06 7 13.6 old/2001_06_samt99_bestof1.html 7 15.5 old/2001_06_samt99_bestof5.html
frsamt992001_07 6 55.5 old/2001_07_samt99_bestof1.html 6 62.3 old/2001_07_samt99_bestof5.html
frsamt992001_08 4 17.8 old/2001_08_samt99_bestof1.html 4 24.5 old/2001_08_samt99_bestof5.html
frsamt992001_09 6 19.6 old/2001_09_samt99_bestof1.html 6 23.1 old/2001_09_samt99_bestof5.html
frsamt992001_10 3 9.1 old/2001_10_samt99_bestof1.html 3 9.3 old/2001_10_samt99_bestof5.html
frsamt992001_11 7 36.1 old/2001_11_samt99_bestof1.html 7 42.7 old/2001_11_samt99_bestof5.html
frsamt992001_12 6 7.6 old/2001_12_samt99_bestof1.html 6 13.8 old/2001_12_samt99_bestof5.html
frsamt992002_01 2 35.5 old/2002_01_samt99_bestof1.html 2 35.5 old/2002_01_samt99_bestof5.html
frsamt992002_02 14 21.6 old/2002_02_samt99_bestof1.html 14 23.9 old/2002_02_samt99_bestof5.html
frsamt992002_03 4 41.0 old/2002_03_samt99_bestof1.html 4 48.0 old/2002_03_samt99_bestof5.html
frsamt992002_04 6 7.3 old/2002_04_samt99_bestof1.html 6 11.7 old/2002_04_samt99_bestof5.html
frsamt992002_05 9 14.7 old/2002_05_samt99_bestof1.html 9 15.3 old/2002_05_samt99_bestof5.html
frsamt992002_06 7 30.8 old/2002_06_samt99_bestof1.html 7 34.3 old/2002_06_samt99_bestof5.html
frsamt992002_07 8 3.6 old/2002_07_samt99_bestof1.html 8 4.2 old/2002_07_samt99_bestof5.html
frsamt992002_08 12 32.3 old/2002_08_samt99_bestof1.html 12 34.6 old/2002_08_samt99_bestof5.html
frsamt992002_09 8 11.7 old/2002_09_samt99_bestof1.html 8 15.5 old/2002_09_samt99_bestof5.html
frsamt992002_10 2 3.9 old/2002_10_samt99_bestof1.html 2 4.5 old/2002_10_samt99_bestof5.html
frsamt992002_11 2 3.0 old/2002_11_samt99_bestof1.html 2 3.0 old/2002_11_samt99_bestof5.html
frsamt992002_12 2 9.5 old/2002_12_samt99_bestof1.html 2 9.5 old/2002_12_samt99_bestof5.html
frsamt992003_02 4 35.5 old/2003_02_samt99_bestof1.html 4 36.7 old/2003_02_samt99_bestof5.html
frsamt992003_03 1 11.0 old/2003_03_samt99_bestof1.html 1 59.0 old/2003_03_samt99_bestof5.html
frsamt992003_04 1 41.0 old/2003_04_samt99_bestof1.html 1 41.0 old/2003_04_samt99_bestof5.html
frsamt992003_05 5 6.4 old/2003_05_samt99_bestof1.html 5 8.4 old/2003_05_samt99_bestof5.html
frsamt992003_06 9 22.5 old/2003_06_samt99_bestof1.html 9 23.0 old/2003_06_samt99_bestof5.html
frsamt992003_07 4 11.3 old/2003_07_samt99_bestof1.html 4 13.7 old/2003_07_samt99_bestof5.html
frsamt992003_10 1 71.0 old/2003_10_samt99_bestof1.html 1 71.0 old/2003_10_samt99_bestof5.html
frsamt992003_11 4 71.8 old/2003_11_samt99_bestof1.html 4 77.0 old/2003_11_samt99_bestof5.html
frsamt992003_12 3 55.8 old/2003_12_samt99_bestof1.html 3 56.3 old/2003_12_samt99_bestof5.html
frsamt992004_01 5 15.3 old/2004_01_samt99_bestof1.html 5 28.6 old/2004_01_samt99_bestof5.html
frsamt992004_02 5 29.5 old/2004_02_samt99_bestof1.html 5 39.3 old/2004_02_samt99_bestof5.html
frsamt992004_03 1 81.0 old/2004_03_samt99_bestof1.html 1 81.0 old/2004_03_samt99_bestof5.html
frsamt99ALL 220 22.4   220 25.8  




Notations used (detailed explanation)

psum  percentage over all proteins
sig  standard deviation
errsig significant difference (to distinguish between two methods)
type   prediction type
date   date when added [yyyy_mm_dd]
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