| METHOD about: | ../../doc/explain_methods.html#PX_about_samt99 |
| METHOD url: | SAMt99 |
| METHOD quote: | K Karplus, C Barrett, and R Hughey:: Hidden Markov Models for Detecting Remote Protein Homologies, Bioinformatics, 14, 846-856, 1999 |
| TYPE : | fr |
| NPROT : | 220 |
| NWEEKS : | 137 |
| NOTE 1 : | here ALL results obtained for samt99 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 5.5 | 2.7 | 3.7 | 6.5 | 22.3 | 27.8 | 59.4 | 116.3 | 34.5 | 38.8 | 203.3 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |