#==================================================================== # Perl-RDB EVA:method.rdb=results of all ids for method=pspt of type=threading # best values of first 5 # Copyright : Volker Eyrich & Burkhard Rost, CUBIC Columbia Univ, New York City # Email : rost@columbia.edu # WWW : http://cubic.bioc.columbia.edu/eva # Version : version 0.1: 2000_04_12 # # -------------------------------------------------------------------------------- # # Notation used : # # NOTATION BODY : # NOTATION date : date when added [yyyy_mm_dd] # NOTATION Target : identifier of target protein # NOTATION Method : abbreviation of prediction method (seq=sequence) # NOTATION Rank : rank of model in method prediction # NOTATION Template : identifier of template protein # NOTATION ModN% : percent of target residues in model # NOTATION TgtN : number of residues in target structure # NOTATION TmptN : number of residues in template structure # NOTATION TmptZ_CE : CE Z-score of a template chosen by a method # NOTATION TmptStrN_CE% : percent of target residues in CE alignment of template # : and target structures # NOTATION TmptRmsd_CE : rmsd (in Anstroms) of CE alignment of template and target structures # NOTATION ModStrN_CE% : percent of target residues in CE alignment of method model and # : target structure # NOTATION ModRmsd_CE : rmsd (in Anstroms) of CE alignment of method model and query structures # NOTATION ModZ_CE : CE Z-score of a method model # NOTATION NXA% : percent of target residues found within a distance of X Angstroms # : in CE structural alignment of model and target structure # NOTATION ALX% : percent of target residues found within a shift of X residues # : in CE structurel alignment of model and target structure # date Method Target -lnP_MMT Z_CE Q_LG1 Q_LG2 N3.5A_Gbl% N5A_Gbl% ModN% ServScore N3.5A_ext_CE% N5A_ext_CE% TgtN 2000_11_27 pspt 1dh3:A 8.1 5.0 -1.152453e+01 4.039473e+01 9.5e+01 9.6e+01 9.6e+01 9.34 9.6e+01 9.6e+01 55 2001_07_12 pspt 1e4s:A 5.0 3.9 -1.696667e+01 2.482665e+01 8.9e+01 9.4e+01 1.0e+02 10.55 8.9e+01 9.2e+01 36 2001_07_12 pspt 1e4t:A 4.1 3.9 1.965473e+01 1.546415e+01 7.8e+01 8.1e+01 9.7e+01 7.49 7.8e+01 8.1e+01 37 2001_11_23 pspt 1eb6:A 20.1 3.7 2.374433e+01 2.224924e+01 6.7e+01 7.2e+01 8.9e+01 28.88 3.4e+01 8.3e+01 177 2000_12_20 pspt 1eo1:A 6.4 4.2 2.291223e+01 8.903436e+00 3.1e+01 3.5e+01 8.5e+01 5.95 4.1e+01 4.6e+01 124 2001_05_16 pspt 1ezv:G 10.2 4.6 6.841300e+00 2.063452e+01 5.9e+01 6.5e+01 7.2e+01 24.42 6.8e+01 6.9e+01 93 2000_12_20 pspt 1f2d:A 27.5 6.3 1.545110e+01 1.579499e+01 5.2e+01 6.6e+01 9.2e+01 21.74 7.0e+01 7.4e+01 341 2001_06_27 pspt 1f7t:E 11.8 3.9 1.960450e+01 1.722814e+01 3.2e+01 5.7e+01 8.9e+01 13.33 6.2e+01 6.5e+01 118 2001_04_04 pspt 1fjr:A 2.0 2.8 3.535808e-01 -1.510429e+00 2.1e+00 3.7e+00 7.6e+01 3.37 1.5e+01 1.8e+01 188 2002_08_07 pspt 1fl9:A 10.3 3.5 1.446295e+01 7.544102e+00 1.5e+01 2.8e+01 8.3e+01 5.70 4.1e+01 5.0e+01 157 2001_03_14 pspt 1fvs:A 10.6 5.2 4.152924e+01 4.037564e+01 9.7e+01 9.7e+01 9.7e+01 17.78 9.7e+01 9.7e+01 72 2001_03_22 pspt 1fw9:A 5.1 3.1 -2.918711e+00 7.135157e-01 3.7e+00 8.5e+00 7.5e+01 4.69 1.9e+01 2.3e+01 164 2001_02_28 pspt 1fx4:A 16.3 4.4 -3.431461e+00 1.649521e+01 4.4e+01 5.3e+01 7.7e+01 21.16 6.5e+01 6.8e+01 231 2001_03_14 pspt 1g12:A 4.5 3.9 2.358937e+01 4.808643e+00 9.6e+00 1.7e+01 7.1e+01 3.38 2.2e+01 2.9e+01 167 2001_08_08 pspt 1gcq:C 6.7 4.4 -1.327826e+01 2.702968e+01 5.8e+01 6.1e+01 6.7e+01 12.15 6.2e+01 6.4e+01 69 2001_11_15 pspt 1gh6:A 9.9 4.7 7.882280e+00 1.544159e+01 4.4e+01 5.5e+01 7.6e+01 17.72 5.3e+01 5.5e+01 114 2001_10_25 pspt 1gmi:A 13.7 2.6 3.552365e+00 2.497494e+01 6.5e+01 7.1e+01 8.8e+01 17.60 7.6e+01 7.7e+01 135 2002_06_21 pspt 1gty:A 9.5 4.9 -8.760660e+00 3.112118e+01 7.0e+01 7.4e+01 8.1e+01 5.21 8.0e+01 8.0e+01 80 2002_05_31 pspt 1gw5:S 12.3 3.5 1.664650e+01 1.252036e+01 3.0e+01 4.2e+01 8.2e+01 4.52 4.3e+01 5.5e+01 142 2001_08_30 pspt 1h8b:A 8.9 3.3 8.756645e+00 4.663916e+00 4.9e+01 7.0e+01 9.3e+01 4.48 5.2e+01 6.0e+01 73 2002_04_10 pspt 1hll:A 2.4 2.6 -1.909066e+00 -5.333522e+00 5.6e+01 5.9e+01 8.4e+01 7.03 5.9e+01 6.2e+01 32 2001_03_07 pspt 1hn5:B 5.4 2.3 -3.023762e+00 5.611288e+00 7.2e+00 1.2e+01 9.1e+01 4.28 2.0e+01 2.6e+01 222 2001_03_07 pspt 1hn5:C 15.2 3.1 -2.922488e+00 2.016622e+01 3.1e+01 3.8e+01 8.4e+01 5.67 3.2e+01 5.4e+01 248 2001_03_07 pspt 1hn5:D 11.8 3.5 -3.069347e+00 7.796512e+00 1.0e+01 2.0e+01 8.0e+01 3.46 2.3e+01 2.8e+01 250 2001_03_21 pspt 1hux:A 18.3 4.6 2.420343e+00 8.687718e+00 8.5e+00 1.5e+01 9.0e+01 7.19 4.9e+01 5.8e+01 259 2002_02_06 pspt 1i1g:A 6.9 4.6 -3.391039e+00 1.090561e+01 2.9e+01 3.2e+01 6.4e+01 4.55 3.2e+01 3.4e+01 140 2001_02_28 pspt 1i1i:P 2.9 3.5 3.864573e+00 1.732790e+00 4.5e-01 7.5e-01 5.1e+01 5.29 8.4e+00 9.5e+00 665 2002_02_12 pspt 1i2u:A 3.6 2.6 3.050318e+01 1.485840e+01 5.2e+01 6.4e+01 8.9e+01 5.79 5.9e+01 6.4e+01 44 2001_04_04 pspt 1iaz:A 2.0 2.3 -4.543912e+00 -1.099833e+00 3.4e+00 7.4e+00 5.8e+01 3.32 1.5e+01 2.0e+01 175 2002_04_01 pspt 1ich:A 12.9 5.0 -7.102326e+00 1.584718e+01 7.4e+01 9.3e+01 9.9e+01 10.54 7.8e+01 8.3e+01 87 2002_04_24 pspt 1icz:A 7.1 2.6 -4.135411e+00 2.616610e-02 6.8e+00 1.4e+01 5.6e+01 3.10 1.5e+01 2.0e+01 249 2001_05_30 pspt 1ii7:A 16.3 3.9 9.282887e+00 8.746833e+00 3.2e+01 3.9e+01 9.2e+01 9.15 4.0e+01 5.2e+01 333 2001_12_12 pspt 1im5:A 19.2 6.2 2.399287e+00 2.649278e+01 6.3e+01 7.3e+01 9.8e+01 20.37 8.4e+01 8.9e+01 179 2001_11_21 pspt 1inl:B 17.7 4.9 -1.836280e-01 8.127310e+00 3.1e+01 3.9e+01 7.6e+01 8.54 3.1e+01 3.7e+01 291 2002_07_23 pspt 1iqo:A 4.2 3.7 -1.389874e+00 5.531117e-01 8.0e+00 1.8e+01 9.4e+01 4.03 3.0e+01 4.5e+01 88 2002_09_11 pspt 1iya:A 11.2 3.1 1.270957e+01 8.379606e+00 3.7e+01 5.2e+01 7.9e+01 13.23 4.5e+01 5.2e+01 187 2002_07_17 pspt 1j5s:B 3.6 4.1 4.384169e+00 3.491141e+00 8.9e-01 2.2e+00 5.8e+01 2.58 2.1e+01 2.7e+01 450 2002_08_14 pspt 1j6r:A 3.2 3.3 4.012132e+00 3.893493e+00 2.0e+00 3.0e+00 7.8e+01 3.60 1.7e+01 2.3e+01 197 2001_08_08 pspt 1j7l:A 13.0 3.7 5.430904e+00 6.321223e+00 2.5e+01 3.6e+01 7.8e+01 4.31 3.7e+01 4.4e+01 263 2002_03_20 pspt 1j8c:A 11.0 4.7 2.314424e+01 1.577233e+01 6.2e+01 6.8e+01 8.8e+01 22.63 6.2e+01 6.6e+01 103 2001_10_24 pspt 1j8i:A 9.4 4.2 2.285590e+01 1.744350e+01 4.3e+01 5.7e+01 7.6e+01 19.77 5.5e+01 6.0e+01 93 2001_09_12 pspt 1j9j:A 6.1 3.9 6.727745e+00 4.525841e+00 9.3e+00 1.3e+01 9.0e+01 3.69 3.1e+01 3.6e+01 247 2002_02_08 pspt 1jh5:A 16.3 4.7 2.498581e+01 2.416738e+01 5.9e+01 6.6e+01 9.1e+01 24.67 7.5e+01 8.1e+01 144 2002_01_09 pspt 1jjo:A 5.8 4.1 -1.566154e+01 3.954585e+01 9.8e+01 9.8e+01 9.8e+01 9.60 9.8e+01 9.8e+01 40 2002_01_09 pspt 1jjo:E 4.1 3.7 -2.036000e+01 4.394058e+01 9.1e+01 9.1e+01 9.1e+01 15.72 9.1e+01 9.1e+01 33 2001_10_17 pspt 1jkg:A 15.8 5.0 1.490142e+01 2.744486e+01 7.2e+01 7.5e+01 8.3e+01 26.68 8.0e+01 8.0e+01 139 2002_07_13 pspt 1jkv:A 16.4 3.9 2.528057e+01 1.438754e+01 3.6e+01 4.4e+01 8.0e+01 3.79 1.2e+01 1.3e+01 266 2002_02_06 pspt 1jkz:A 6.8 4.1 3.148330e+01 2.986017e+01 9.6e+01 9.8e+01 1.0e+02 10.74 9.6e+01 9.8e+01 46 2002_07_17 pspt 1jm1:A 14.7 5.5 -4.847606e+00 1.843413e+01 5.2e+01 5.4e+01 6.2e+01 16.60 5.7e+01 5.7e+01 202 2002_03_27 pspt 1jmk:C 21.8 5.5 1.634457e+00 1.587809e+01 5.0e+01 6.5e+01 9.8e+01 18.35 7.1e+01 7.5e+01 222 2001_12_12 pspt 1jmv:B 8.0 2.6 5.555919e+00 6.359278e+00 3.6e+01 4.5e+01 9.4e+01 11.40 3.0e+01 3.4e+01 137 2002_03_01 pspt 1jo8:A 8.6 4.9 4.493365e+01 4.285181e+01 9.5e+01 9.7e+01 9.7e+01 14.81 9.5e+01 9.7e+01 58 2001_10_26 pspt 1jqr:A 19.2 4.7 1.324080e+01 1.400720e+01 3.6e+01 6.0e+01 9.8e+01 31.40 7.2e+01 8.0e+01 174 2001_11_21 pspt 1jrj:A 2.8 3.1 -7.197286e-01 9.555947e+00 1.8e+01 3.1e+01 1.0e+02 4.04 5.4e+01 6.4e+01 39 2002_04_03 pspt 1jrk:D 10.8 4.4 2.238843e+01 1.413610e+01 1.4e+01 3.7e+01 8.9e+01 13.84 5.5e+01 6.9e+01 150 2002_02_27 pspt 1jrm:A 5.8 3.3 -3.101239e+00 2.443369e+00 4.8e+00 7.7e+00 8.1e+01 4.81 3.5e+01 4.6e+01 104 2001_08_17 pspt 1jru:A 10.0 3.9 -7.359036e+00 7.209101e+00 4.9e+01 6.7e+01 9.3e+01 19.12 6.1e+01 6.9e+01 89 2002_02_27 pspt 1jsb:A 9.5 4.2 -9.165565e+00 1.443334e+01 5.9e+01 7.4e+01 9.4e+01 4.53 6.9e+01 7.4e+01 70 2002_04_10 pspt 1jss:A 24.1 4.4 -3.210899e+00 2.507028e+01 8.0e+01 8.9e+01 9.5e+01 32.44 9.0e+01 9.3e+01 199 2001_12_07 pspt 1jtx:A 7.9 4.7 5.666576e+00 1.166942e+01 2.2e+00 4.8e+00 9.8e+01 7.04 6.2e+01 6.9e+01 186 2001_12_28 pspt 1k2f:A 6.0 2.3 -6.231933e+00 2.023883e+00 5.8e+00 1.1e+01 5.2e+01 3.70 2.3e+01 2.7e+01 190 2001_10_31 pspt 1k30:A 3.8 4.2 7.689721e+00 2.012428e+00 1.4e+00 5.2e+00 6.0e+01 3.21 1.5e+01 1.8e+01 363 2002_04_10 pspt 1k3k:A 14.4 4.4 3.452016e+00 5.970960e+00 2.6e+01 5.3e+01 9.2e+01 18.50 5.0e+01 6.0e+01 146 2002_02_27 pspt 1k5h:B 8.9 3.9 6.411993e+00 3.984636e+00 4.9e+00 8.7e+00 3.7e+01 3.17 2.4e+01 2.7e+01 391 2001_12_07 pspt 1k8k:F 3.6 2.8 1.054116e+01 6.989369e+00 4.8e+00 9.6e+00 9.0e+01 3.31 1.8e+01 2.2e+01 167 2002_07_12 pspt 1kam:A 16.1 4.1 1.422069e+01 1.551322e+01 4.2e+01 5.2e+01 9.2e+01 17.17 6.7e+01 7.0e+01 180 2002_06_28 pspt 1kc3:A 31.3 6.6 1.685970e+01 1.817617e+01 6.5e+01 8.0e+01 9.8e+01 18.07 8.1e+01 8.7e+01 298 2002_03_27 pspt 1kg0:C 15.3 4.7 -5.090000e+00 1.823150e+01 5.6e+01 7.1e+01 8.8e+01 25.94 7.4e+01 7.6e+01 136 2002_01_16 pspt 1khv:A 31.3 2.8 1.397420e+00 1.026666e+01 3.6e+01 5.5e+01 8.2e+01 22.51 4.1e+01 4.7e+01 493 2002_07_19 pspt 1kmz:A 11.6 3.9 -3.504113e+00 1.210268e+01 4.3e+01 6.2e+01 9.6e+01 12.03 5.0e+01 7.0e+01 125 2002_01_23 pspt 1kov:A 8.0 4.4 1.171727e+01 1.149818e+01 1.2e+01 2.4e+01 9.6e+01 21.48 4.6e+01 4.8e+01 123 2002_05_24 pspt 1kpp:A 13.0 5.2 -3.100510e+00 1.170662e+01 2.4e+01 3.4e+01 8.3e+01 8.83 5.8e+01 6.7e+01 144 2002_02_27 pspt 1ktz:B 6.5 2.6 -6.274045e+00 1.286223e+01 3.4e+01 4.6e+01 9.1e+01 3.76 3.6e+01 4.5e+01 106 2002_03_20 pspt 1kvn:A 7.4 4.4 1.575603e+01 1.331354e+01 6.1e+01 6.8e+01 8.5e+01 18.43 6.8e+01 7.2e+01 104 2002_09_18 pspt 1kwg:A 23.0 5.0 1.921882e+01 5.573983e+00 1.2e+01 1.7e+01 4.7e+01 9.54 2.7e+01 3.2e+01 644 2002_07_31 pspt 1kzq:A 6.0 2.8 -1.755478e+00 7.832282e-01 1.6e+00 3.2e+00 8.9e+01 6.67 1.3e+01 2.0e+01 253 2002_03_20 pspt 1kzy:C 12.4 1.6 -4.394245e+00 9.710614e+00 2.2e+01 3.2e+01 6.0e+01 6.73 1.3e+01 1.6e+01 232 2002_04_03 pspt 1l0o:A 13.5 5.2 2.804191e+01 1.776083e+01 5.7e+01 6.2e+01 9.5e+01 14.14 5.7e+01 6.3e+01 141 2002_04_01 pspt 1l3y:A 3.5 1.6 1.742657e+00 -1.916347e+00 4.9e+01 6.8e+01 9.3e+01 11.34 4.6e+01 6.8e+01 41 2002_08_21 pspt 1l5p:A 13.6 5.2 2.920526e+01 3.129976e+01 8.5e+01 9.2e+01 1.0e+02 25.38 9.1e+01 9.4e+01 93 2002_04_24 pspt 1l7k:A 3.6 3.5 -8.248134e-01 -4.796199e-03 1.8e+00 3.2e+00 7.9e+01 4.94 1.0e+01 1.3e+01 339 2002_08_14 pspt 1l7y:A 11.0 4.7 1.735852e+01 1.347530e+01 6.2e+01 6.5e+01 9.0e+01 4.83 7.0e+01 7.4e+01 94 2002_04_10 pspt 1l9x:A 21.5 6.1 -2.057580e+00 1.357120e+01 3.2e+01 4.4e+01 7.8e+01 19.44 5.7e+01 6.2e+01 288 2002_06_19 pspt 1lqv:A 21.7 4.6 5.843793e+00 2.274880e+01 7.8e+01 8.5e+01 9.7e+01 28.66 8.4e+01 9.1e+01 172 2002_06_19 pspt 1lrh:A 13.4 5.6 2.402811e+01 1.829405e+01 4.4e+01 5.3e+01 7.3e+01 5.90 5.6e+01 5.7e+01 160