| METHOD about: | ../../doc/explain_methods.html#PX_about_prospect |
| METHOD url: | Prospect |
| METHOD quote: | Y Xu, D Xu:: Protein threading using PROSPECT: Design and evaluation. Proteins, 40, 343-354, 2000. \n Y Xu, E C Uberbacher:: A polynomial-time algorithm for a class of protein threading problems. Journal of Computer Applications in Biosciences, 12, 511-517, 1996. |
| TYPE : | fr |
| NPROT : | 150 |
| NWEEKS : | 73 |
| NOTE 1 : | here ALL results obtained for prospect are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.5 | 2.3 | 2.1 | 4.2 | 12.4 | 18.5 | 81.8 | 4.1 | 31.5 | 36.5 | 147.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |