Method | Nprot | Nweek | Detailed results for method | ||
---|---|---|---|---|---|
ALL | 610 | 247 | method/index.html | ||
3D-PSSM | 417 | 194 | method/3dpssm.html | ||
BLAST | 591 | 242 | method/blast.html | ||
FUGUE | 496 | 211 | method/fugue.html | ||
Libellula | 99 | 57 | method/libellula.html | ||
Prospect | 124 | 60 | method/prospect.html | ||
PSI-BLAST | 595 | 246 | method/psiblast.html | ||
SAMt99 | 199 | 118 | method/samt99.html | ||
ssearch | 589 | 243 | method/ssearch.html | ||
Superfamily | 245 | 106 | method/superfamily.html |
Set 1 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 1 | 26 | 1 | 3D-PSSM | 12 | 6.1 (+/-1.2) | 7 | 2.6 (+/-0.3) | 8 | -0.4 (+/-1.6) | 14 | 2.7 (+/-1.3) | 13.1 (+/-3.4) | 20.6 (+/-4.7) | 30.3 (+/-3.9) | 35.1 (+/-3.9) | 72.8 (+/-3.1) | ||||||||||||||||||||||
BLAST | 0 | 1.3 (+/-0.2) | 0 | 1.7 (+/-0.2) | 1 | -15.8 (+/-2.3) | 2 | -2.2 (+/-0.9) | 3.2 (+/-0.9) | 5.4 (+/-1.3) | 11.9 (+/-1.7) | 16.0 (+/-2.4) | 30.5 (+/-3.9) | |||||||||||||||||||||||||
FUGUE | 11 | 5.4 (+/-1.0) | 9 | 3.0 (+/-0.3) | 11 | -2.9 (+/-2.8) | 13 | 3.3 (+/-1.6) | 12.2 (+/-3.6) | 18.3 (+/-4.7) | 31.6 (+/-4.6) | 35.8 (+/-4.8) | 68.6 (+/-6.6) | |||||||||||||||||||||||||
Libellula | 10 | 5.7 (+/-1.2) | 5 | 1.7 (+/-0.3) | 7 | -1.2 (+/-1.9) | 12 | 2.6 (+/-1.4) | 12.5 (+/-3.4) | 19.6 (+/-4.8) | 19.5 (+/-4.5) | 22.6 (+/-4.8) | 73.6 (+/-5.0) | |||||||||||||||||||||||||
Prospect | 12 | 6.3 (+/-1.2) | 9 | 2.8 (+/-0.3) | 10 | 1.1 (+/-2.1) | 12 | 3.4 (+/-1.5) | 14.1 (+/-4.0) | 22.6 (+/-5.0) | 33.5 (+/-4.5) | 38.0 (+/-4.6) | 78.4 (+/-3.7) | |||||||||||||||||||||||||
PSI-BLAST | 3 | 2.4 (+/-0.5) | 2 | 1.9 (+/-0.2) | 3 | -12.4 (+/-2.8) | 5 | -0.7 (+/-1.2) | 6.2 (+/-2.1) | 10.7 (+/-3.0) | 13.1 (+/-2.5) | 16.0 (+/-2.8) | 31.4 (+/-4.0) | |||||||||||||||||||||||||
SAMt99 | 11 | 5.5 (+/-1.0) | 9 | 2.8 (+/-0.3) | 10 | 0.7 (+/-2.7) | 12 | 4.0 (+/-1.6) | 16.5 (+/-4.1) | 22.7 (+/-5.1) | 28.1 (+/-4.4) | 32.2 (+/-4.4) | 52.3 (+/-4.9) | |||||||||||||||||||||||||
ssearch | 2 | 2.1 (+/-0.6) | 2 | 1.8 (+/-0.2) | 0 | -5.2 (+/-1.2) | 4 | -1.4 (+/-1.1) | 4.2 (+/-2.1) | 7.6 (+/-3.1) | 17.8 (+/-2.8) | 23.2 (+/-2.9) | 80.2 (+/-3.6) |
Set 2 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 2 | 59 | 1 | 3D-PSSM | 35 | 7.8 (+/-0.9) | 16 | 2.9 (+/-0.2) | 13 | -2.2 (+/-1.3) | 35 | 4.8 (+/-1.3) | 23.0 (+/-3.4) | 30.6 (+/-4.0) | 38.2 (+/-3.2) | 44.7 (+/-3.4) | 78.2 (+/-2.2) | ||||||||||||||||||||||
BLAST | 12 | 2.7 (+/-0.3) | 5 | 2.0 (+/-0.2) | 9 | -10.4 (+/-2.0) | 16 | 0.1 (+/-1.1) | 14.1 (+/-3.1) | 18.7 (+/-3.4) | 21.0 (+/-2.9) | 24.9 (+/-3.2) | 38.0 (+/-3.4) | |||||||||||||||||||||||||
FUGUE | 27 | 6.6 (+/-0.9) | 17 | 2.9 (+/-0.2) | 12 | -2.7 (+/-1.4) | 31 | 4.5 (+/-1.3) | 21.3 (+/-3.6) | 28.9 (+/-4.1) | 37.6 (+/-3.4) | 43.2 (+/-3.4) | 76.9 (+/-3.3) | |||||||||||||||||||||||||
PSI-BLAST | 15 | 3.0 (+/-0.4) | 4 | 2.0 (+/-0.2) | 4 | -15.4 (+/-1.8) | 14 | -0.8 (+/-1.0) | 12.8 (+/-2.6) | 18.2 (+/-3.0) | 19.6 (+/-2.6) | 22.4 (+/-2.9) | 34.3 (+/-3.1) | |||||||||||||||||||||||||
SAMt99 | 31 | 6.0 (+/-0.6) | 15 | 2.8 (+/-0.2) | 13 | -4.3 (+/-1.6) | 33 | 4.4 (+/-1.3) | 22.0 (+/-3.6) | 28.3 (+/-4.1) | 35.4 (+/-3.5) | 40.3 (+/-3.7) | 59.8 (+/-3.8) | |||||||||||||||||||||||||
ssearch | 17 | 4.5 (+/-0.8) | 12 | 2.4 (+/-0.2) | 7 | -4.2 (+/-1.2) | 18 | 1.9 (+/-1.3) | 14.2 (+/-3.3) | 19.8 (+/-3.9) | 30.4 (+/-3.4) | 35.8 (+/-3.6) | 79.4 (+/-2.8) | |||||||||||||||||||||||||
Superfamily | 25 | 5.2 (+/-0.7) | 12 | 2.6 (+/-0.2) | 10 | -7.8 (+/-1.8) | 29 | 2.7 (+/-1.2) | 18.2 (+/-3.4) | 25.3 (+/-4.0) | 31.2 (+/-3.4) | 35.7 (+/-3.6) | 52.5 (+/-3.9) |
Set 3 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 3 | 144 | 1 | 3D-PSSM | 79 | 6.9 (+/-0.5) | 38 | 2.8 (+/-0.1) | 39 | -0.7 (+/-0.8) | 82 | 4.7 (+/-0.8) | 20.5 (+/-2.2) | 28.1 (+/-2.5) | 37.8 (+/-2.1) | 43.9 (+/-2.1) | 76.9 (+/-1.4) | ||||||||||||||||||||||
BLAST | 21 | 2.3 (+/-0.2) | 7 | 1.9 (+/-0.1) | 21 | -9.8 (+/-1.2) | 30 | -0.1 (+/-0.6) | 11.8 (+/-1.9) | 15.5 (+/-2.1) | 19.8 (+/-1.8) | 23.4 (+/-2.0) | 38.2 (+/-2.1) | |||||||||||||||||||||||||
FUGUE | 67 | 6.1 (+/-0.5) | 47 | 3.0 (+/-0.1) | 42 | -1.7 (+/-1.1) | 76 | 5.1 (+/-0.8) | 20.1 (+/-2.3) | 26.9 (+/-2.6) | 37.9 (+/-2.2) | 43.2 (+/-2.2) | 77.3 (+/-2.1) | |||||||||||||||||||||||||
PSI-BLAST | 23 | 2.6 (+/-0.2) | 7 | 1.9 (+/-0.1) | 13 | -13.0 (+/-1.2) | 30 | -0.9 (+/-0.6) | 11.0 (+/-1.6) | 15.3 (+/-1.8) | 18.0 (+/-1.6) | 20.9 (+/-1.7) | 34.4 (+/-1.9) | |||||||||||||||||||||||||
SAMt99 | 74 | 5.8 (+/-0.4) | 34 | 2.9 (+/-0.1) | 45 | -1.6 (+/-1.0) | 79 | 4.9 (+/-0.8) | 22.4 (+/-2.3) | 28.3 (+/-2.6) | 35.5 (+/-2.2) | 40.0 (+/-2.3) | 60.0 (+/-2.3) | |||||||||||||||||||||||||
ssearch | 38 | 3.7 (+/-0.4) | 23 | 2.3 (+/-0.1) | 22 | -2.2 (+/-0.7) | 44 | 2.0 (+/-0.8) | 13.5 (+/-2.2) | 17.9 (+/-2.5) | 29.3 (+/-2.2) | 34.9 (+/-2.2) | 81.1 (+/-1.6) |