ScanProsite

This program allows to scan a protein sequence (either from Swiss-Prot or TrEMBL or provided by the user) for the occurrence of patterns and profiles stored in the PROSITE database, or to search protein databases with a user-entered pattern [Reference / Download ps_scan, the standalone version]. The program PRATT can be used to generate your own patterns. You may either:

enter a PROSITE accession number or pattern to search the Swiss-Prot/TrEMBL and/or PDB databases with a pattern, OR
enter a sequence or a Swiss-Prot/TrEMBL accession number to scan the sequence with all patterns, profiles and rules in PROSITE, OR
fill in both fields to find all occurrences of a pattern or profile in a sequence.

Scan a protein for PROSITE matches
Enter a Swiss-Prot/TrEMBL accession number (AC) (for example P05130) or a sequence identifier (ID) (for example NOTC_DROME), or a PDB identifier, or paste your own protein sequence in the box below: