Score E
Sequences producing significant alignments: (bits) Value
gi|2062876|gb|AA404872.1|AA404872 28256 Lambda-PRL2 Arabido... 718 0.0 
gi|19799527|dbj|AU230817.1|AU230817 AU230817 RAFL19 Arabido... 615 e-172
gi|7233740|gb|AW569084.1|AW569084 si63c01.y1 Gm-r1030 Glyci... 80 1e-11
gi|5888939|gb|AW030183.1|AW030183 EST273438 tomato callus, ... 68 5e-08
gi|15337669|gb|BI498325.1|BI498325 sag18f08.y1 Gm-c1080 Gly... 64 8e-07
gi|12015132|gb|BF715860.1|BF715860 saa10f10.y1 Gm-c1058 Gly... 62 3e-06
gi|2759436|gb|T44636.1|T44636 7899 Lambda-PRL2 Arabidopsis ... 62 3e-06
gi|18357212|dbj|BJ189271.1|BJ189271 BJ189271 normalized ful... 60 1e-05
gi|7746203|dbj|AV417025.1|AV417025 AV417025 Lotus japonicus... 60 1e-05
gi|4380808|gb|AI485437.1|AI485437 EST243758 tomato ovary, T... 60 1e-05
gi|13602474|gb|BG587410.1|BG587410 EST489182 MHAM Medicago ... 58 5e-05
gi|11900978|gb|BF636820.1|BF636820 NF050A01LF1F1002 Develop... 58 5e-05
gi|10697763|gb|BE997487.1|BE997487 EST429210 GVSN Medicago ... 58 5e-05
gi|7588702|gb|AW704492.1|AW704492 sk53g08.y1 Gm-c1019 Glyci... 58 5e-05
gi|9697669|gb|BE499052.1|BE499052 WHE0960_G10_M20ZS Wheat p... 48 0.050
gi|6462059|gb|AW187623.1|AW187623 BNLGHi8351 Six-day Cotton... 48 0.050
gi|4880939|dbj|AU065238.1|AU065238 AU065238 Rice cDNA from ... 46 0.20
gi|15202867|gb|BI425635.1|BI425635 sah69d07.y1 Gm-c1049 Gly... 44 0.78
gi|13252279|gb|BG363182.1|BG363182 sac11d03.y1 Gm-c1040 Gly... 44 0.78
gi|13083137|gb|BF624118.2|BF624118 HVSMEa0009K16f Hordeum v... 44 0.78
gi|12497418|gb|BG047556.1|BG047556 saa81a01.y1 Gm-c1063 Gly... 44 0.78
gi|11412640|gb|BF424651.1|BF424651 su49g02.y1 Gm-c1069 Glyc... 44 0.78
gi|11311484|gb|BF352410.1|BF352410 IL3-HT0616-180800-239-D0... 44 0.78
gi|9960680|gb|BE642998.1|BE642998 Cri2_7_J18_SP6 Ceratopter... 44 0.78
gi|9565804|gb|BE475313.1|BE475313 sp75g11.y1 Gm-c1044 Glyci... 44 0.78
gi|7559027|gb|AW684291.1|AW684291 NF015B02NR1F1000 Nodulate... 44 0.78
gi|5820456|gb|AI988662.1|AI988662 sd06c02.y1 Gm-c1020 Glyci... 44 0.78
gi|983255|gb|R97595.1|R97595 yq59c04.r1 Soares fetal liver ... 44 0.78
gi|19264665|gb|BM880921.1|BM880921 rb19g05.y1 Meloidogyne i... 42 3.1
gi|18792627|gb|BM553681.1|BM553681 AGENCOURT_6541599 NIH_MG... 42 3.1
gi|18040429|gb|BM308723.1|BM308723 sak49f06.y1 Gm-c1036 Gly... 42 3.1
gi|16444499|dbj|BB527567.2|BB527567 BB527567 RIKEN full-len... 42 3.1
gi|16229151|gb|BI924876.1|BI924876 EST544765 tomato flower,... 42 3.1
gi|15780074|gb|BI777182.1|BI777182 EBro03_SQ002_E19_R IGF B... 42 3.1
gi|15660204|gb|BI697575.1|BI697575 603348742F1 NCI_CGAP_Mam... 42 3.1
gi|15573976|gb|BI659753.1|BI659753 603302937F1 NIH_CGAP_Mam... 42 3.1
gi|13607252|gb|BG589112.1|BG589112 EST490921 MHRP- Medicago... 42 3.1
gi|13599749|gb|BG584685.1|BG584685 EST486446 MHAM Medicago ... 42 3.1
gi|13086715|gb|BG299428.1|BG299428 HVSMEa0019P09f Hordeum v... 42 3.1
gi|12635690|gb|BG135502.1|BG135502 EST468394 tomato crown g... 42 3.1
gi|12448877|gb|BG005966.1|BG005966 QV4-GN0248-251100-593-h0... 42 3.1
gi|11972304|gb|BF686896.1|BF686896 602102857F1 NCI_CGAP_Kid... 42 3.1
gi|10972847|gb|BF133807.1|BF133807 601778728F1 NCI_CGAP_Lu3... 42 3.1
gi|9671396|emb|AL371643.1|AL371643 MtBA45E03R1 MtBA Medicag... 42 3.1
gi|9667228|emb|AL367475.1|AL367475 MtBA15C06R1 MtBA Medicag... 42 3.1
gi|9562601|gb|BE472110.1|BE472110 EST416963 potato stolon, ... 42 3.1
gi|9562479|gb|BE471988.1|BE471988 EST416841 potato stolon, ... 42 3.1
gi|9456091|gb|BE450588.1|BE450588 EST401475 tomato root, pl... 42 3.1
gi|9431201|gb|BE433358.1|BE433358 EST399887 tomato breaker ... 42 3.1
gi|9431019|gb|BE433176.1|BE433176 EST399705 tomato breaker ... 42 3.1
gi|9397099|dbj|BB479490.1|BB479490 BB479490 RIKEN full-leng... 42 3.1
gi|9158599|gb|BE282720.1|BE282720 601100746F1 NCI_CGAP_Lu29... 42 3.1
gi|8827885|gb|BE211615.1|BE211615 so64a10.y1 Gm-c1040 Glyci... 42 3.1
gi|8103752|gb|AW928370.1|AW928370 EST307103 tomato flower b... 42 3.1
gi|7749913|dbj|AV420736.1|AV420736 AV420736 Lotus japonicus... 42 3.1
gi|7614328|gb|AW719807.1|AW719807 LjNEST10C7r Lotus japonic... 42 3.1
gi|7322683|gb|AW616613.1|AW616613 EST323024 L. hirsutum tri... 42 3.1
gi|7322400|gb|AW616359.1|AW616359 EST322770 L. hirsutum tri... 42 3.1
gi|6567175|gb|AW234794.1|AW234794 sf19c10.y1 Gm-c1028 Glyci... 42 3.1
gi|6529082|gb|AW218208.1|AW218208 EST303389 tomato radicle,... 42 3.1
gi|6377600|dbj|AV337548.1|AV337548 AV337548 RIKEN full-leng... 42 3.1
gi|5840166|gb|AI993261.1|AI993261 701495871 A. thaliana, Oh... 42 3.1
gi|5310550|dbj|AV124316.1|AV124316 AV124316 Mus musculus C5... 42 3.1
gi|5272565|gb|AI774524.1|AI774524 EST255624 tomato resistan... 42 3.1
gi|4602211|gb|AI593163.1|AI593163 vs86b02.y1 Barstead mouse... 42 3.1
gi|4437114|gb|AI522979.1|AI522979 sb07d03.y1 Gm-c1004 Glyci... 42 3.1
gi|3729281|gb|AI178643.1|AI178643 EST222324 Normalized rat ... 42 3.1
gi|3326207|gb|AI055093.1|AI055093 coau0003A08 Cotton Boll A... 42 3.1
gi|2571420|gb|AA644991.1|AA644991 vs86b02.r1 Barstead mouse... 42 3.1
Alignments
>gi|2062876|gb|AA404872.1|AA404872 28256 Lambda-PRL2 Arabidopsis thaliana cDNA clone 143N9XP 3'.
Length = 478
Score = 718 bits (362), Expect = 0.0
Identities = 362/362 (100%)
Strand = Plus / Plus
Query: 2178 ccaaagatcactgcagttacaaatcgaagaacaaggtcggtatcttcagatgatgattga 2237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 ccaaagatcactgcagttacaaatcgaagaacaaggtcggtatcttcagatgatgattga 176
Query: 2238 gaaacaacagaagatgcaagagaacaaaaaagactctacttcctcatcatcaatgccaga 2297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 gaaacaacagaagatgcaagagaacaaaaaagactctacttcctcatcatcaatgccaga 236
Query: 2298 agctgacccttcagctccatcaccaaacctttcacaacctttcctccataaagcaaccaa 2357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 agctgacccttcagctccatcaccaaacctttcacaacctttcctccataaagcaaccaa 296
Query: 2358 ttcagaaccatcaataactcagaaactgcagaatggttctagcacaatggatcaaagtga 2417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ttcagaaccatcaataactcagaaactgcagaatggttctagcacaatggatcaaagtga 356
Query: 2418 atctacttctgggactagtaatagaaaacgggttagagaagattagacatctcatgagta 2477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 atctacttctgggactagtaatagaaaacgggttagagaagattagacatctcatgagta 416
Query: 2478 tgatccaaagatgttgcaaacatatgtaattgtgtatataaaattgaaaatatcacagca 2537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tgatccaaagatgttgcaaacatatgtaattgtgtatataaaattgaaaatatcacagca 476
Query: 2538 gc 2539
||
Sbjct: 477 gc 478
Score = 71.9 bits (36), Expect = 3e-09
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 1981 aatcactgaagctctccggttacagatgaaagttcaaaaa-caactccacgagcaacttg 2039
|||| |||| ||||||||||| ||| |||||||||||||| |||||||||| ||||||||
Sbjct: 52 aatccctgaggctctccggttccagntgaaagttcaaaaaccaactccacgngcaacttg 111
Query: 2040 ag 2041
||
Sbjct: 112 ag 113
>gi|19799527|dbj|AU230817.1|AU230817 AU230817 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-89-P11 3'.
Length = 399
Score = 615 bits (310), Expect = e-172
Identities = 357/369 (96%), Gaps = 4/369 (1%)
Strand = Plus / Minus
Query: 2174 agatccaaagatcactgcagttacaaatcgaagaacaaggtcggtatcttcagatgatga 2233
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 368 agatccaaagatcactgcagttacaaatcgaagaacaaggtcggtatcttcagattatga 309
Query: 2234 ttgagaaacaacagaagatgcaagagaacaaaaaagactctacttcctcatcatcaatgc 2293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttgagaaacaacagaagatgcaagagaacaaaaaagactctacttcctcatcatcaatgc 249
Query: 2294 cagaagctgacccttcagctccatcaccaaacctttcacaacctttcctccataaagcaa 2353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 cagaagctgacccttcagctccatcaccaaacctttcacaacctttcctccataaagcaa 189
Query: 2354 cc--aattcagaaccatcaataactcagaaactgcagaatggttctagcacaatggatca 2411
|| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cccaatttcagaaccatcaataactcagaaactgcagaatggttctagcacaatggatca 129
Query: 2412 aagtgaatctacttctgggactagtaatagaaaacgggttagagaagattagacatctca 2471
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 128 aagtgaatctacttct-ggactagtaatagaaaccgggttagagaagattagacatctca 70
Query: 2472 tgagtatgat-ccaaagatgttgcaaacatatgtaattgtgtatataaaattgaaaatat 2530
|||||||||| |||||||| || ||||||||| ||||||| |||||||||||||||||||
Sbjct: 69 tgagtatgatcccaaagattttccaaacatatttaattgtttatataaaattgaaaatat 10
Query: 2531 cacagcagc 2539
|||| ||||
Sbjct: 9 cacaccagc 1
Score = 58.0 bits (29), Expect = 5e-05
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 2009 aaagttcaaaaacaactccacgagcaacttgag 2041
|||||||| ||||||||||||||||||||||||
Sbjct: 399 aaagttcagaaacaactccacgagcaacttgag 367
>gi|7233740|gb|AW569084.1|AW569084 si63c01.y1 Gm-r1030 Glycine max cDNA clone GENOME SYSTEMS CLONE ID:
Gm-r1030-3577 5' similar to SW:PEXC_HUMAN O00623
PEROXIN-12 ;.
Length = 473
Score = 79.8 bits (40), Expect = 1e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 2838 agatgttgtttcaggtgggaggtgaaggcacacgccccaccttctttgagatggctgctg 2897
||||||||||||||||||| || |||||| |||||||||||||| |||||||| || |
Sbjct: 61 agatgttgtttcaggtgggcgggcaaggcagtcgccccaccttcttcgagatggcggcgg 120
Query: 2898 ctcagcaacttcctgctagccttcgcgccgct 2929
|||| ||||| || || ||||| |||||||||
Sbjct: 121 ctcaacaactgccggcgagcctccgcgccgct 152
>gi|5888939|gb|AW030183.1|AW030183 EST273438 tomato callus, TAMU Lycopersicon esculentum cDNA clone
cLEC17D7.
Length = 583
Score = 67.9 bits (34), Expect = 5e-08
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 1312 atgcgttggacaccagaacttcatgaagcatttgtcgaagctatcaatcagctcggtggt 1371
||||||||||||||||||||||||||||| ||||| ||||| |||| |||| |||||
Sbjct: 160 atgcgttggacaccagaacttcatgaagcctttgtagaagcagtcaacaagcttggtgga 219
Query: 1372 agtgaa 1377
||||||
Sbjct: 220 agtgaa 225
Score = 46.1 bits (23), Expect = 0.20
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1976 attgaaatcactgaagctctccggttacagatgaaagttcaaaaaca 2022
||||| ||||||||||| | |||||||||||| ||||||| |||||
Sbjct: 406 attgagatcactgaagcattgcggttacagatggaagttcagaaaca 452
>gi|15337669|gb|BI498325.1|BI498325 sag18f08.y1 Gm-c1080 Glycine max cDNA clone GENOME SYSTEMS CLONE ID:
Gm-c1080-1432 5' similar to TR:Q9ZQT9 Q9ZQT9 WERBP-1
PROTEIN. ;.
Length = 347
Score = 63.9 bits (32), Expect = 8e-07
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 1309 agaatgcgttggacaccagaacttcatgaagcatttgtcgaagctatcaatcagctcggt 1368
|||||||||||||| ||||||||||| || || ||||| ||||| | |||||||| |||
Sbjct: 176 agaatgcgttggactccagaacttcacgaggcctttgtggaagcagttaatcagcttggt 235
Query: 1369 ggtagtga 1376
||||||||
Sbjct: 236 ggtagtga 243
>gi|12015132|gb|BF715860.1|BF715860 saa10f10.y1 Gm-c1058 Glycine max cDNA clone GENOME SYSTEMS CLONE ID:
Gm-c1058-1028 5' similar to SW:PEXC_HUMAN O00623
PEROXIN-12 ;.
Length = 367
Score = 61.9 bits (31), Expect = 3e-06
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 2875 caccttctttgagatggctgctgctcagcaacttcctgctagccttcgcgccgctctcac 2934
||||||||| |||||||| || ||||| |||||||| || ||||| ||||||||||| ||
Sbjct: 1 caccttcttcgagatggcggcggctcaacaacttccggcgagcctccgcgccgctctgac 60
Query: 2935 ctattccctcggcgt 2949
|| ||| |||||||
Sbjct: 61 atactccatcggcgt 75
>gi|2759436|gb|T44636.1|T44636 7899 Lambda-PRL2 Arabidopsis thaliana cDNA clone 128I2T7.
Length = 391
Score = 61.9 bits (31), Expect = 3e-06
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 1493 gaagctcatcaatagccctgggttgaccgtttatcatgtcaaaagccatttgcag 1547
||||||| | |||| |||||| |||||| |||||||||| |||||||||||||||
Sbjct: 1 gaagctcttgaataaccctggcttgaccatttatcatgtaaaaagccatttgcag 55
Score = 42.1 bits (21), Expect = 3.1
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1624 cagaaatacagaactgcaaggtataaacc 1652
|||||||| ||||| ||||||||||||||
Sbjct: 53 cagaaatatagaacggcaaggtataaacc 81
>gi|18357212|dbj|BJ189271.1|BJ189271 BJ189271 normalized full length cDNA library, chloronemata,
caulonemata and malformed buds Physcomitrella patens
subsp. patens cDNA clone pphb46c01 5'.
Length = 448
Score = 60.0 bits (30), Expect = 1e-05
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 2837 aagatgttgtttcaggtgggaggtgaaggcacacgccccaccttctttgagatg 2890
||||||||| | ||||||||||| || ||| | |||||||||||||||||||||
Sbjct: 338 aagatgttgatgcaggtgggaggcgatggcgctcgccccaccttctttgagatg 391
>gi|7746203|dbj|AV417025.1|AV417025 AV417025 Lotus japonicus young plants (two-week old) Lotus japonicus
cDNA clone MWM137e02_r 5'.
Length = 424
Score = 60.0 bits (30), Expect = 1e-05
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 1312 atgcgttggacaccagaacttcatgaagcatttgtcgaagctatcaatcagctcggtggt 1371
|||||||||||||| || ||||||||||||||||| || ||| |||| || || |||||
Sbjct: 226 atgcgttggacacctgagcttcatgaagcatttgtggaggctgtcaaccaacttggtggg 285
Query: 1372 agtgaa 1377
||||||
Sbjct: 286 agtgaa 291
>gi|4380808|gb|AI485437.1|AI485437 EST243758 tomato ovary, TAMU Lycopersicon esculentum cDNA clone
cLED7O15.
Length = 531
Score = 60.0 bits (30), Expect = 1e-05
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 1312 atgcgttggacaccagaacttcatgaagcatttgtcgaagctatcaatcagctcggtggt 1371
||||||||||| ||||||||||||||||| ||||| ||||| |||| |||| |||||
Sbjct: 219 atgcgttggactccagaacttcatgaagcctttgttgaagcagtcaacaagcttggtgga 278
Query: 1372 agtgaa 1377
||||||
Sbjct: 279 agtgaa 284
>gi|13602474|gb|BG587410.1|BG587410 EST489182 MHAM Medicago truncatula/Glomus versiforme mixed EST
library cDNA clone pMHAM-48L16 5' end.
Length = 736
Score = 58.0 bits (29), Expect = 5e-05
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 1309 agaatgcgttggacaccagaacttcatgaagcatttgtcgaagctatcaatcagctcggt 1368
||||||||||||| ||||||||||| ||||| ||||| ||||| |||| ||||| |||
Sbjct: 437 agaatgcgttggagtccagaacttcacgaagcttttgtggaagcagtcaaccagcttggt 496
Query: 1369 ggtag 1373
|||||
Sbjct: 497 ggtag 501
>gi|11900978|gb|BF636820.1|BF636820 NF050A01LF1F1002 Developing leaf Medicago truncatula cDNA clone
NF050A01LF 5'.
Length = 640
Score = 58.0 bits (29), Expect = 5e-05
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 1309 agaatgcgttggacaccagaacttcatgaagcatttgtcgaagctatcaatcagctcggt 1368
||||||||||||| ||||||||||| ||||| ||||| ||||| |||| ||||| |||
Sbjct: 428 agaatgcgttggagtccagaacttcacgaagcttttgtggaagcagtcaaccagcttggt 487
Query: 1369 ggtag 1373
|||||
Sbjct: 488 ggtag 492
>gi|10697763|gb|BE997487.1|BE997487 EST429210 GVSN Medicago truncatula cDNA clone pGVSN-1C12.
Length = 430
Score = 58.0 bits (29), Expect = 5e-05
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 1309 agaatgcgttggacaccagaacttcatgaagcatttgtcgaagctatcaatcagctcggt 1368
||||||||||||| ||||||||||| ||||| ||||| ||||| |||| ||||| |||
Sbjct: 142 agaatgcgttggagtccagaacttcacgaagcttttgtggaagcagtcaaccagcttggt 201
Query: 1369 ggtag 1373
|||||
Sbjct: 202 ggtag 206
>gi|7588702|gb|AW704492.1|AW704492 sk53g08.y1 Gm-c1019 Glycine max cDNA clone GENOME SYSTEMS CLONE ID:
Gm-c1019-6327 5' similar to TR:Q9ZQT9 Q9ZQT9 WERBP-1
PROTEIN. ;.
Length = 527
Score = 58.0 bits (29), Expect = 5e-05
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1310 gaatgcgttggacaccagaacttcatgaagcatttgt 1346
|||||||||||||||||||||||||||| || |||||
Sbjct: 344 gaatgcgttggacaccagaacttcatgaggcgtttgt 380
>gi|9697669|gb|BE499052.1|BE499052 WHE0960_G10_M20ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0960_G10_M20.
Length = 470
Score = 48.1 bits (24), Expect = 0.050
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1512 gggttgaccgtttatcatgtcaaaagccatttgcag 1547
||||||||| |||||||||||||||| ||| |||||
Sbjct: 371 gggttgaccatttatcatgtcaaaagtcatctgcag 406
>gi|6462059|gb|AW187623.1|AW187623 BNLGHi8351 Six-day Cotton fiber Gossypium hirsutum cDNA 5'.
Length = 664
Score = 48.1 bits (24), Expect = 0.050
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 2189 tgcagttacaaatcgaagaacaaggtcggtatcttcagatgatgattgagaaacaa 2244
||||| ||| ||||||| ||||||| ||||||| || |||||| |||||||||||
Sbjct: 201 tgcagctacgaatcgaaaaacaagggaggtatctgcaaatgatgtttgagaaacaa 256
>gi|4880939|dbj|AU065238.1|AU065238 AU065238 Rice cDNA from immature leaf including apical meristem Oryza
sativa cDNA clone E60871_1A.
Length = 712
Score = 46.1 bits (23), Expect = 0.20
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1512 gggttgaccgtttatcatgtcaaaagccatttgca 1546
||||||||| | |||||||||||||||||| ||||
Sbjct: 412 gggttgaccatctatcatgtcaaaagccatctgca 446
>gi|15202867|gb|BI425635.1|BI425635 sah69d07.y1 Gm-c1049 Glycine max cDNA clone GENOME SYSTEMS CLONE
ID: Gm-c1049-3614 5' similar to TR:O82489 O82489
T12H20.4 PROTEIN. ;.
Length = 443
Score = 44.1 bits (22), Expect = 0.78
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 683 gaatttgttttcatcttcttcc 704
||||||||||||||||||||||
Sbjct: 441 gaatttgttttcatcttcttcc 420
>gi|13252279|gb|BG363182.1|BG363182 sac11d03.y1 Gm-c1040 Glycine max cDNA clone GENOME SYSTEMS CLONE ID:
Gm-c1040-4373 5' similar to TR:Q9XEF3 Q9XEF3 HYPOTHETICAL
CYTOSKELETAL PROTEIN. [1] ;.
Length = 558
Score = 44.1 bits (22), Expect = 0.78
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1526 tcatgtcaaaagccatttgcag 1547
||||||||||||||||||||||
Sbjct: 167 tcatgtcaaaagccatttgcag 188
>gi|13083137|gb|BF624118.2|BF624118 HVSMEa0009K16f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare cDNA clone HVSMEa0009K16f.
Length = 885
Score = 44.1 bits (22), Expect = 0.78
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 2810 agaagaagagattagaggaggaggaagaag 2839
||||||||||| |||||||||||||||||
Sbjct: 150 agaagaagagaggagaggaggaggaagaag 179
>gi|12497418|gb|BG047556.1|BG047556 saa81a01.y1 Gm-c1063 Glycine max cDNA clone GENOME SYSTEMS CLONE
ID: Gm-c1063-769 5' similar to TR:O82489 O82489 T12H20.4
PROTEIN. ;.
Length = 432
Score = 44.1 bits (22), Expect = 0.78
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 683 gaatttgttttcatcttcttcc 704
||||||||||||||||||||||
Sbjct: 420 gaatttgttttcatcttcttcc 399
>gi|11412640|gb|BF424651.1|BF424651 su49g02.y1 Gm-c1069 Glycine max cDNA clone GENOME SYSTEMS CLONE ID:
Gm-c1069-316 5' similar to TR:O82489 O82489 T12H20.4
PROTEIN. ;.
Length = 626
Score = 44.1 bits (22), Expect = 0.78
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 683 gaatttgttttcatcttcttcc 704
||||||||||||||||||||||
Sbjct: 275 gaatttgttttcatcttcttcc 254
>gi|11311484|gb|BF352410.1|BF352410 IL3-HT0616-180800-239-D08 HT0616 Homo sapiens cDNA.
Length = 502
Score = 44.1 bits (22), Expect = 0.78
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 2708 tatcttctttaccaatttctgc 2729
||||||||||||||||||||||
Sbjct: 491 tatcttctttaccaatttctgc 470
>gi|9960680|gb|BE642998.1|BE642998 Cri2_7_J18_SP6 Ceratopteris Spore Library Ceratopteris richardii cDNA
clone Cri2_7_J18 5'.
Length = 803
Score = 44.1 bits (22), Expect = 0.78
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 2876 accttctttgagatggctgctgctcagcaacttcctgc 2913
||||||||||| |||||||| || ||||| ||||||||
Sbjct: 287 accttctttgaaatggctgcagcacagcagcttcctgc 324
>gi|9565804|gb|BE475313.1|BE475313 sp75g11.y1 Gm-c1044 Glycine max cDNA clone GENOME SYSTEMS CLONE ID:
Gm-c1044-1821 5' similar to TR:Q9ZQT9 Q9ZQT9 WERBP-1
PROTEIN. ;.
Length = 355
Score = 44.1 bits (22), Expect = 0.78
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 2203 gaagaacaaggtcggtatcttcagatgatgattgagaa 2240
||||||||||| |||| |||||||||||| |||||||
Sbjct: 209 gaagaacaaggaaggtaccttcagatgatgtttgagaa 246
>gi|7559027|gb|AW684291.1|AW684291 NF015B02NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF015B02NR 5'.
Length = 546
Score = 44.1 bits (22), Expect = 0.78
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 1312 atgcgttggacaccagaacttcatgaagcatttgtcgaagctatcaatcagctcggtggt 1371
||||||||||| || || ||||| ||||||||||| || ||| |||| || || |||||
Sbjct: 138 atgcgttggactcctgagcttcacgaagcatttgtggaggctgtcaaccaacttggtggg 197
Query: 1372 agtgaa 1377
||||||
Sbjct: 198 agtgaa 203
>gi|5820456|gb|AI988662.1|AI988662 sd06c02.y1 Gm-c1020 Glycine max cDNA clone GENOME SYSTEMS CLONE ID:
Gm-c1020-891 5' similar to TR:O82489 O82489 T12H20.4
PROTEIN. ;.
Length = 577
Score = 44.1 bits (22), Expect = 0.78
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 683 gaatttgttttcatcttcttcc 704
||||||||||||||||||||||
Sbjct: 304 gaatttgttttcatcttcttcc 283
>gi|983255|gb|R97595.1|R97595 yq59c04.r1 Soares fetal liver spleen 1NFLS Homo sapiens cDNA clone
IMAGE:200070 5'.
Length = 448
Score = 44.1 bits (22), Expect = 0.78
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 725 tgtttcatcttcctcccaggca 746
||||||||||||||||||||||
Sbjct: 304 tgtttcatcttcctcccaggca 283
>gi|19264665|gb|BM880921.1|BM880921 rb19g05.y1 Meloidogyne incognita egg pAMP1 Bird Meloidogyne incognita
cDNA 5'.
Length = 484
Score = 42.1 bits (21), Expect = 3.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2820 attagaggaggaggaagaaga 2840
|||||||||||||||||||||
Sbjct: 307 attagaggaggaggaagaaga 327
>gi|18792627|gb|BM553681.1|BM553681 AGENCOURT_6541599 NIH_MGC_88 Homo sapiens cDNA clone IMAGE:5740515
5'.
Length = 1066
Score = 42.1 bits (21), Expect = 3.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2107 ttgtctgatttcttagttttt 2127
|||||||||||||||||||||
Sbjct: 33 ttgtctgatttcttagttttt 53
>gi|18040429|gb|BM308723.1|BM308723 sak49f06.y1 Gm-c1036 Glycine max cDNA clone SOYBEAN CLONE ID:
Gm-c1036-6419 5' similar to TR:Q9SJW0 Q9SJW0
TRANSFACTOR-LIKE PROTEIN. ;.
Length = 597
Score = 42.1 bits (21), Expect = 3.1
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1515 ttgaccgtttatcatgtcaaaagccattt 1543
|||||| |||| |||||||||||||||||
Sbjct: 349 ttgaccatttaccatgtcaaaagccattt 377
>gi|16444499|dbj|BB527567.2|BB527567 BB527567 RIKEN full-length enriched, 15 days embryo head Mus musculus
cDNA clone D930041C19 3'.
Length = 694
Score = 42.1 bits (21), Expect = 3.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2497 acatatgtaattgtgtatataaaat 2521
||||||| |||||||||||||||||
Sbjct: 127 acatatggaattgtgtatataaaat 151
>gi|16229151|gb|BI924876.1|BI924876 EST544765 tomato flower, buds 0-3 mm Lycopersicon esculentum cDNA
clone cTOA24D8 5' end.
Length = 422
Score = 42.1 bits (21), Expect = 3.1
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 2838 agatgttgtttcaggtgggaggtgaaggcacacgccccaccttctttgagatggctgctg 2897
||||||||||||| || ||||| |||| || || || || |||||||| ||||||||||
Sbjct: 153 agatgttgtttcaagtaggaggacaagggactcgtcctactttctttgaaatggctgctg 212
Query: 2898 c 2898
|
Sbjct: 213 c 213
>gi|15780074|gb|BI777182.1|BI777182 EBro03_SQ002_E19_R IGF Barley EBro03 library Hordeum vulgare cDNA
clone EBro03_SQ002_E19 5'.
Length = 235
Score = 42.1 bits (21), Expect = 3.1
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 2189 tgcagttacaaatcgaagaacaaggtcggtatcttcagatgatgattga 2237
||||||| | ||| ||||||||||| |||||||||||||||| ||||
Sbjct: 180 tgcagttgcgaattgaagaacaagggaagtatcttcagatgatgtttga 228
>gi|15660204|gb|BI697575.1|BI697575 603348742F1 NCI_CGAP_Mam2 Mus musculus cDNA clone IMAGE:5376322 5'.
Length = 720
Score = 42.1 bits (21), Expect = 3.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2822 tagaggaggaggaagaagatg 2842
|||||||||||||||||||||
Sbjct: 181 tagaggaggaggaagaagatg 201
>gi|15573976|gb|BI659753.1|BI659753 603302937F1 NIH_CGAP_Mam4 Mus musculus cDNA clone IMAGE:5348817 5'.
Length = 642
Score = 42.1 bits (21), Expect = 3.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2822 tagaggaggaggaagaagatg 2842
|||||||||||||||||||||
Sbjct: 217 tagaggaggaggaagaagatg 237
>gi|13607252|gb|BG589112.1|BG589112 EST490921 MHRP- Medicago truncatula cDNA clone pMHRP-59B6.
Length = 613
Score = 42.1 bits (21), Expect = 3.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2237 agaaacaacagaagatgcaagagaa 2261
|||||||||||||||||||| ||||
Sbjct: 222 agaaacaacagaagatgcaatagaa 246
>gi|13599749|gb|BG584685.1|BG584685 EST486446 MHAM Medicago truncatula/Glomus versiforme mixed EST
library cDNA clone pMHAM-19G6 5' end.
Length = 842
Score = 42.1 bits (21), Expect = 3.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2237 agaaacaacagaagatgcaagagaa 2261
|||||||||||||||||||| ||||
Sbjct: 691 agaaacaacagaagatgcaatagaa 715
>gi|13086715|gb|BG299428.1|BG299428 HVSMEa0019P09f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare cDNA clone HVSMEa0019P09f.
Length = 614
Score = 42.1 bits (21), Expect = 3.1
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 2189 tgcagttacaaatcgaagaacaaggtcggtatcttcagatgatgattga 2237
||||||| | ||| ||||||||||| |||||||||||||||| ||||
Sbjct: 125 tgcagttgcgaattgaagaacaagggaagtatcttcagatgatgtttga 173
>gi|12635690|gb|BG135502.1|BG135502 EST468394 tomato crown gall Lycopersicon esculentum cDNA clone
cTOE22D22 5' sequence.
Length = 564
Score = 42.1 bits (21), Expect = 3.1
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 2838 agatgttgtttcaggtgggaggtgaaggcacacgccccaccttctttgagatggctgctg 2897
||||||||||||| || ||||| |||| || || || || |||||||| ||||||||||
Sbjct: 70 agatgttgtttcaagtaggaggacaagggactcgtcctactttctttgaaatggctgctg 129
Query: 2898 c 2898
|
Sbjct: 130 c 130
>gi|12448877|gb|BG005966.1|BG005966 QV4-GN0248-251100-593-h08 GN0248 Homo sapiens cDNA.
Length = 176
Score = 42.1 bits (21), Expect = 3.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 478 cttctcaatactgcacttgtt 498
|||||||||||||||||||||
Sbjct: 71 cttctcaatactgcacttgtt 51
>gi|11972304|gb|BF686896.1|BF686896 602102857F1 NCI_CGAP_Kid14 Mus musculus cDNA clone IMAGE:4220847 5'.
Length = 1046
Score = 42.1 bits (21), Expect = 3.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2822 tagaggaggaggaagaagatg 2842
|||||||||||||||||||||
Sbjct: 48 tagaggaggaggaagaagatg 68
>gi|10972847|gb|BF133807.1|BF133807 601778728F1 NCI_CGAP_Lu30 Mus musculus cDNA clone IMAGE:4006710 5'.
Length = 901
Score = 42.1 bits (21), Expect = 3.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2822 tagaggaggaggaagaagatg 2842
|||||||||||||||||||||
Sbjct: 525 tagaggaggaggaagaagatg 545
>gi|9671396|emb|AL371643.1|AL371643 MtBA45E03R1 MtBA Medicago truncatula cDNA clone MtBA45E03 T7.
Length = 464
Score = 42.1 bits (21), Expect = 3.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2237 agaaacaacagaagatgcaagagaa 2261
|||||||||||||||||||| ||||
Sbjct: 152 agaaacaacagaagatgcaatagaa 176
>gi|9667228|emb|AL367475.1|AL367475 MtBA15C06R1 MtBA Medicago truncatula cDNA clone MtBA15C06 T7.
Length = 505
Score = 42.1 bits (21), Expect = 3.1
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 2237 agaaacaacagaagatgcaagagaa 2261
|||||||||||||||||||| ||||
Sbjct: 334 agaaacaacagaagatgcaatagaa 310
>gi|9562601|gb|BE472110.1|BE472110 EST416963 potato stolon, Cornell University Solanum tuberosum cDNA
clone cSTA31N22.
Length = 579
Score = 42.1 bits (21), Expect = 3.1
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 2838 agatgttgtttcaggtgggaggtgaaggcacacgccccaccttctttgagatggctgctg 2897
||||||||||||| || ||||| |||| || || || || |||||||| ||||||||||
Sbjct: 92 agatgttgtttcaagtaggaggacaagggactcgtcctactttctttgaaatggctgctg 151
Query: 2898 c 2898
|
Sbjct: 152 c 152
>gi|9562479|gb|BE471988.1|BE471988 EST416841 potato stolon, Cornell University Solanum tuberosum cDNA
clone cSTA31D3.
Length = 568
Score = 42.1 bits (21), Expect = 3.1
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 2838 agatgttgtttcaggtgggaggtgaaggcacacgccccaccttctttgagatggctgctg 2897
||||||||||||| || ||||| |||| || || || || |||||||| ||||||||||
Sbjct: 81 agatgttgtttcaagtaggaggacaagggactcgtcctactttctttgaaatggctgctg 140
Query: 2898 c 2898
|
Sbjct: 141 c 141
>gi|9456091|gb|BE450588.1|BE450588 EST401475 tomato root, plants pre-anthesis, Cornell University
Lycopersicon esculentum cDNA clone cLEY14C10.
Length = 505
Score = 42.1 bits (21), Expect = 3.1
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 2838 agatgttgtttcaggtgggaggtgaaggcacacgccccaccttctttgagatggctgctg 2897
||||||||||||| || ||||| |||| || || || || |||||||| ||||||||||
Sbjct: 57 agatgttgtttcaagtaggaggacaagggactcgtcctactttctttgaaatggctgctg 116
Query: 2898 c 2898
|
Sbjct: 117 c 117
>gi|9431201|gb|BE433358.1|BE433358 EST399887 tomato breaker fruit, TIGR Lycopersicon esculentum cDNA
clone cLEG13E4.
Length = 604
Score = 42.1 bits (21), Expect = 3.1
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 2838 agatgttgtttcaggtgggaggtgaaggcacacgccccaccttctttgagatggctgctg 2897
||||||||||||| || ||||| |||| || || || || |||||||| ||||||||||
Sbjct: 153 agatgttgtttcaagtaggaggacaagggactcgtcctactttctttgaaatggctgctg 212
Query: 2898 c 2898
|
Sbjct: 213 c 213
>gi|9431019|gb|BE433176.1|BE433176 EST399705 tomato breaker fruit, TIGR Lycopersicon esculentum cDNA
clone cLEG12H15.
Length = 630
Score = 42.1 bits (21), Expect = 3.1
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 2838 agatgttgtttcaggtgggaggtgaaggcacacgccccaccttctttgagatggctgctg 2897
||||||||||||| || ||||| |||| || || || || |||||||| ||||||||||
Sbjct: 153 agatgttgtttcaagtaggaggacaagggactcgtcctactttctttgaaatggctgctg 212
Query: 2898 c 2898
|
Sbjct: 213 c 213
Database: Database of GenBank+EMBL+DDBJ sequences from EST Divisions
Posted date: Mar 29, 2002 2:35 AM
Number of letters in database: 990,634,823
Number of sequences in database: 11,146,866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,362,482
Number of Sequences: 11146866
Number of extensions: 10362482
Number of successful extensions: 2836914
Number of sequences better than 10.0: 70
length of query: 2963
length of database: 5,285,602,119
effective HSP length: 22
effective length of query: 2941
effective length of database: 5,040,371,067
effective search space: 14823731308047
effective search space used: 14823731308047
T: 0
A: 30
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
