SignalP 3.0 Server - prediction results

Technical University of Denmark



Using neural networks (NN) and hidden Markov models (HMM) trained on eukaryotes



> test target ID
SignalP-NN result:

# data

>test                  length = 70
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    27       0.217   0.32   NO
  max. Y    27       0.336   0.33   YES
  max. S    12       0.886   0.87   YES
  mean S     1-26    0.800   0.48   YES
       D     1-26    0.568   0.43   YES
# Most likely cleavage site between pos. 26 and 27: VMG-LV

SignalP-HMM result:

# data

>#
Prediction: Signal peptide
Signal peptide probability: 0.912
Signal anchor probability: 0.069
Max cleavage site probability: 0.417 between pos. 32 and 33
# gnuplot script for making the plot(s)
Explain the output. Go back.