Related Structures
Score E
Sequences producing significant alignments: (bits) Value
gi|15608473|ref|NP_215849.1| hypothetical protein Rv1333 [M... 493 e-138
gi|15827589|ref|NP_301852.1| possible hydrolase [Mycobacter... 405 e-112
gi|41408525|ref|NP_961361.1| hypothetical protein MAP2427c ... 400 e-110
gi|37526152|ref|NP_929496.1| hypothetical protein [Photorha... 192 6e-48
gi|20808213|ref|NP_623384.1| L-aminopeptidase/D-esterase [T... 188 1e-46
gi|22971282|ref|ZP_00018257.1| hypothetical protein [Chloro... 188 2e-46
gi|17989243|ref|NP_541876.1| ENDO-TYPE 6-AMINOHEXANOATE OLI... 179 5e-44
gi|13470389|ref|NP_101957.1| hypothetical protein [Mesorhiz... 179 6e-44
gi|23500102|ref|NP_699542.1| conserved hypothetical protein... 178 1e-43
gi|18310404|ref|NP_562338.1| conserved hypothetical protein... 177 2e-43
gi|39936874|ref|NP_949150.1| Peptidase family T4 [Rhodopseu... 176 5e-43
gi|21325284|dbj|BAB99906.1| L-aminopeptidase/D-esterase [Co... 176 6e-43
gi|19553713|ref|NP_601715.1| L-aminopeptidase/D-esterase [C... 174 3e-42
gi|38234425|ref|NP_940192.1| Conserved hypothetical protein... 173 5e-42
gi|25028963|ref|NP_739017.1| conserved hypothetical protein... 172 7e-42
gi|21221628|ref|NP_627407.1| conserved hypothetical protein... 171 2e-41
gi|15965508|ref|NP_385861.1| CONSERVED HYPOTHETICAL PROTEIN... 165 9e-40
gi|27380789|ref|NP_772318.1| blr5678 [Bradyrhizobium japoni... 164 2e-39
gi|30577697|emb|CAD18988.1| putative cysteine transferase [... 162 7e-39
gi|16126426|ref|NP_420990.1| conserved hypothetical protein... 157 2e-37
gi|29830227|ref|NP_824861.1| hypothetical protein [Streptom... 144 2e-33
gi|17936440|ref|NP_533230.1| conserved hypothetical protein... 139 9e-32
gi|15889823|ref|NP_355504.1| AGR_C_4649p [Agrobacterium tum... 138 2e-31
gi|15805808|ref|NP_294506.1| conserved hypothetical protein... 119 1e-25
gi|15898366|ref|NP_342971.1| Conserved hypothetical protein... 112 9e-24
gi|423943|pir||A47039 nylon oligomer-degrading enzyme EIII ... 77 5e-13
gi|23009700|ref|ZP_00050653.1| COG3191: L-aminopeptidase/D-... 62 1e-08
gi|23061446|ref|ZP_00086291.1| COG3191: L-aminopeptidase/D-... 56 1e-06
gi|32041534|ref|ZP_00139117.1| COG3191: L-aminopeptidase/D-... 52 1e-05
gi|15596683|ref|NP_250177.1| hypothetical protein [Pseudomo... 52 1e-05
gi|22984022|ref|ZP_00029183.1| COG3191: L-aminopeptidase/D-... 50 5e-05
gi|22975947|ref|ZP_00021868.1| COG3191: L-aminopeptidase/D-... 47 4e-04
gi|20807555|ref|NP_622726.1| L-aminopeptidase/D-esterase [T... 47 8e-04
gi|14590032|ref|NP_142096.1| D-aminopeptidase [Pyrococcus h... 45 0.002
gi|38103362|gb|EAA50063.1| hypothetical protein MG03822.4 [... 45 0.002
gi|18978296|ref|NP_579653.1| d-aminopeptidase [Pyrococcus f... 44 0.004
gi|26990549|ref|NP_745974.1| D-aminopeptidase putative [Pse... 43 0.011
gi|23098305|ref|NP_691771.1| D-aminopeptidase [Oceanobacill... 37 0.41
gi|5821800|pdb|1B65|A Chain A, Structure Of L-Aminopeptidas... 37 0.48 
gi|17546102|ref|NP_519504.1| PROBABLE D-AMINOPEPTIDASE PROT... 37 0.50
Alignments
>gi|15608473|ref|NP_215849.1| hypothetical protein Rv1333 [Mycobacterium tuberculosis H37Rv]
gi|15840788|ref|NP_335825.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|31792529|ref|NP_855022.1| PROBABLE HYDROLASE [Mycobacterium bovis subsp. bovis AF2122/97]
gi|1722985|sp|Q10644|YD33_MYCTU Hypothetical protein Rv1333/MT1375/Mb1368
gi|7478142|pir||A70771 probable hydrolase - Mycobacterium tuberculosis (strain H37RV)
gi|1340099|emb|CAA98097.1| PROBABLE HYDROLASE [Mycobacterium tuberculosis H37Rv]
gi|13880983|gb|AAK45639.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|31618118|emb|CAD94229.1| PROBABLE HYDROLASE [Mycobacterium bovis subsp. bovis AF2122/97]
Length = 344
Score = 493 bits (1270), Expect = e-138
Identities = 344/344 (100%), Positives = 344/344 (100%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL
Sbjct: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
Query: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG 120
DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG
Sbjct: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG 120
Query: 121 GWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAV 180
GWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAV
Sbjct: 121 GWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAV 180
Query: 181 VNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC 240
VNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC
Sbjct: 181 VNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC 240
Query: 241 DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPET 300
DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPET
Sbjct: 241 DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPET 300
Query: 301 QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS 344
QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS
Sbjct: 301 QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS 344
>gi|15827589|ref|NP_301852.1| possible hydrolase [Mycobacterium leprae]
gi|1722984|sp|P53425|YD33_MYCLE Hypothetical protein ML1167
gi|2145674|pir||S72794 hypothetical protein B1549_C2_208 - Mycobacterium leprae
gi|466914|gb|AAA50889.1| B1549_C2_208 [Mycobacterium leprae]
gi|13093140|emb|CAC31548.1| possible hydrolase [Mycobacterium leprae]
Length = 362
Score = 405 bits (1040), Expect = e-112
Identities = 268/352 (76%), Positives = 287/352 (81%), Gaps = 12/352 (3%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
MNSITD+ GI+VGHY RLDPDASLGAGWACGVTVVL PPGTVGAVDCRGG PGTRETDLL
Sbjct: 8 MNSITDISGIQVGHYHRLDPDASLGAGWACGVTVVLTPPGTVGAVDCRGGVPGTRETDLL 67
Query: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG 120
DPANSVRFVDA+LLAGGSAYGLAAADGVMRWLEEH RGV M GVVPIVPGAVIFDL VG
Sbjct: 68 DPANSVRFVDAVLLAGGSAYGLAAADGVMRWLEEHERGVVMLGGVVPIVPGAVIFDLSVG 127
Query: 121 GWNCRPTADFGYSACAAA--------GVDVAVGTVGVGVGARAGALKGGVGTASATLQSG 172
++CRPTA+FGY AC AA VAVGTVG GVGARAG LKGGVGTAS TL+SG
Sbjct: 128 DFHCRPTAEFGYLACQAAYDAAVGGQDATVAVGTVGAGVGARAGVLKGGVGTASITLESG 187
Query: 173 VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFN 232
TVG + VVN+ G+VVD ATGLPWM DL+ EFALR P EQIA AQL SPL A N
Sbjct: 188 PTVGAVVVVNSVGDVVDRATGLPWMTDLIDEFALRPPSPEQIAGFAQLKSPLSA----LN 243
Query: 233 TTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGV 292
TTIGV+A DA LSPAAC+R+A+AA DGLARTIRPAHT LDGDTVFALATGAV A V
Sbjct: 244 TTIGVVATDATLSPAACQRVAMAAQDGLARTIRPAHTALDGDTVFALATGAVEATATADV 303
Query: 293 PAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS 344
P A+SPET L+T VGAAA DCLARAVL VL A+ VAGIPTY MFPGAFG+
Sbjct: 304 PVAMSPETGLITEVGAAADDCLARAVLVAVLAAESVAGIPTYCGMFPGAFGT 355
>gi|41408525|ref|NP_961361.1| hypothetical protein MAP2427c [Mycobacterium avium subsp.
paratuberculosis str. k10]
gi|41396881|gb|AAS04744.1| hypothetical protein MAP2427c [Mycobacterium avium subsp.
paratuberculosis str. k10]
Length = 347
Score = 400 bits (1027), Expect = e-110
Identities = 275/346 (79%), Positives = 292/346 (84%), Gaps = 3/346 (0%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
MN+ITDVGGIRVGH+QRLDPDASLGAGWACGVTVVL PGTVGAVDCRGGAPGTRETDLL
Sbjct: 1 MNAITDVGGIRVGHHQRLDPDASLGAGWACGVTVVLTAPGTVGAVDCRGGAPGTRETDLL 60
Query: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG 120
DPAN+VRFVDA+LLAGGSAYGLAAADGVMRWLEEH RGVAMD GVVPIVPGAVIFDLPVG
Sbjct: 61 DPANTVRFVDAVLLAGGSAYGLAAADGVMRWLEEHDRGVAMDGGVVPIVPGAVIFDLPVG 120
Query: 121 GWNCRPTADFGY---SACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGV 177
GW CRPTA+FGY +A A AVGTVG GVGARAGALKGGVGTAS TL SGVTVG
Sbjct: 121 GWQCRPTAEFGYLACAAAARDDDAPAVGTVGAGVGARAGALKGGVGTASRTLPSGVTVGA 180
Query: 178 LAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGV 237
LAVVN+AG VVD ATGLPWM DLV +F LR PPAEQI A A L SP + P NT I V
Sbjct: 181 LAVVNSAGEVVDRATGLPWMTDLVEQFGLRPPPAEQIEAFAALPSPSNPLDNPLNTVIAV 240
Query: 238 IACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALS 297
+A DAALS AACRR+A+AAHDGLAR+IRPAHTP+DGDTVF LATGAV VPPEA PAA S
Sbjct: 241 VATDAALSAAACRRVAVAAHDGLARSIRPAHTPVDGDTVFVLATGAVEVPPEADTPAAFS 300
Query: 298 PETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFG 343
PET+L T VG AAADCLA AVL GVL A VAGIP+YRD+ PGA G
Sbjct: 301 PETRLATEVGVAAADCLAHAVLGGVLAADSVAGIPSYRDVLPGALG 346
>gi|37526152|ref|NP_929496.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36785582|emb|CAE14532.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 325
Score = 192 bits (489), Expect = 6e-48
Identities = 139/343 (40%), Positives = 189/343 (55%), Gaps = 36/343 (10%)
Query: 3 SITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDP 62
+I DV G++VGH + G ++++ G V VD RG APGTRET+LLDP
Sbjct: 7 TILDVPGVKVGHAE--------DELQQTGCSIIIFDDGAVCGVDVRGSAPGTRETELLDP 58
Query: 63 ANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGW 122
N+V+ V+A++L+GGSA+GL +A GVMR+LEE ++G + VVPIVP A+IFDL G
Sbjct: 59 INTVQKVNAVVLSGGSAFGLDSASGVMRYLEERKKGFDVGVTVVPIVPAAIIFDLNFGDP 118
Query: 123 NCRPTADFGYSACAAAGVD-VAVGTVGVGVGARAG-------ALKGGVGTASATLQSGVT 174
RP A GY A A V G +G G GA G A+KGG+GTAS L G+T
Sbjct: 119 AVRPDAKMGYLAAQNASVTPFPSGNIGAGTGATIGKIAGFDKAMKGGLGTASVKLPDGLT 178
Query: 175 VGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
+G + VVNA G + DP G + G + I + + ++ F NTT
Sbjct: 179 IGAMVVVNAVGEIRDPKNG----KTIAGACDENGHLIDLIPYIIK-NNKDNNFTQGTNTT 233
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
IG+I C+A ++ + +++A AHDGLARTI P HT DGDT+FA ATG V
Sbjct: 234 IGIICCNANMNKSQMKKVAQMAHDGLARTIYPVHTMSDGDTIFAAATGGV---------- 283
Query: 295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDM 337
V VG AA+ +A AVL V +A+ G+ Y D+
Sbjct: 284 -----DSSVNIVGILAAEVMAAAVLDAVKSAKSKFGVRGYADL 321
>gi|20808213|ref|NP_623384.1| L-aminopeptidase/D-esterase [Thermoanaerobacter tengcongensis]
gi|20516808|gb|AAM24988.1| L-aminopeptidase/D-esterase [Thermoanaerobacter tengcongensis]
Length = 324
Score = 188 bits (477), Expect = 1e-46
Identities = 139/345 (40%), Positives = 190/345 (55%), Gaps = 42/345 (12%)
Query: 4 ITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA 63
I ++ GI+VG+ + ++ AG C TVV+ G VD RGGAPGTRETDL+
Sbjct: 8 IKEIEGIKVGNAENVE------AGTGC--TVVICEEGATPGVDVRGGAPGTRETDLIRSE 59
Query: 64 NSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV--VPIVPGAVIFDLPVGG 121
N V + A++LAGGSA+GL AA GVMR+LEE +G+ D+GV +PIV A++FDL VG
Sbjct: 60 NLVEKIHAVVLAGGSAFGLDAASGVMRYLEE--KGIGFDTGVLKIPIVASAILFDLAVGN 117
Query: 122 WNCRPTADFGYSACA-AAGVDVAVGTVGVGVGARAG-------ALKGGVGTASATLQSG- 172
RP + GY AC A + G G G GA G A+K G+G + LQ+G
Sbjct: 118 PYIRPDFEMGYKACVNAEKGEFTYGNKGAGTGASVGKFLGIKRAMKSGLGCYA--LQAGE 175
Query: 173 VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFN 232
+ VG + VNA G+V DP TG +A L+ E + E+ A + + F N
Sbjct: 176 LKVGAVVAVNALGDVFDPETG-EVIAGLLDEKGEKIISTEE-AIIENIGREKSVFRN--N 231
Query: 233 TTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGV 292
TTIGV+ +A LS A ++A AHDG AR I+P HT DGDT+F +ATG V V P
Sbjct: 232 TTIGVVITNAMLSKAEANKVASMAHDGYARAIKPVHTMFDGDTIFVMATGKVKVDP---- 287
Query: 293 PAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDM 337
T+VG A + RA++ V A+ G+ +Y+D+
Sbjct: 288 -----------TSVGVLAVKAVERAIVRAVKEAESAYGLKSYKDL 321
>gi|22971282|ref|ZP_00018257.1| hypothetical protein [Chloroflexus aurantiacus]
Length = 354
Score = 188 bits (477), Expect = 2e-46
Identities = 173/348 (49%), Positives = 202/348 (58%), Gaps = 45/348 (12%)
Query: 3 SITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDP 62
+IT V G+ VG Q D DA GVTVVL P G VD RGGAPGTRETDLL+P
Sbjct: 39 AITAVQGVLVG--QVADQDA------LTGVTVVLTPNGATAGVDVRGGAPGTRETDLLNP 90
Query: 63 ANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV--VPIVPGAVIFDLPVG 120
N V+ V A++L GGSA+GLAAA GV+ WL H RG D G+ VPIVP AVIFDL +G
Sbjct: 91 VNLVQQVHAVVLTGGSAFGLAAATGVVSWL--HERGYGFDVGLTKVPIVPAAVIFDLGIG 148
Query: 121 GWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAG-------ALKGGVGTASATLQSGV 173
+ P A GY+AC AA VA G+VG G+GA G A++GGVG+ S TL GV
Sbjct: 149 RSDVWPDATMGYAACMAAEAAVAEGSVGAGIGATVGKVGGMATAMRGGVGSWSETLADGV 208
Query: 174 TVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLG----AFNT 229
TVG LAVVNA G+VVD + A RAP I A L S L A T
Sbjct: 209 TVGALAVVNAFGDVVDDHGRIIAGA--------RAPDQSLIGTSALLRSGLSRRSFADTT 260
Query: 230 PFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPE 289
NTTI V+A DA L AA R+A+ A DGLAR IRPAH+P DGDTVFALATG PP
Sbjct: 261 GQNTTIAVVATDARLDKAAATRLAMMAQDGLARAIRPAHSPFDGDTVFALATGVYEAPP- 319
Query: 290 AGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDM 337
+ +GA AAD LA A++ V A AG+P RD+
Sbjct: 320 -------------LVTLGAVAADVLATAIMRAVQAATAAAGVPAARDL 354
>gi|17989243|ref|NP_541876.1| ENDO-TYPE 6-AMINOHEXANOATE OLIGOMER HYDROLASE [Brucella melitensis]
gi|25375727|pir||AI3621 endo-type 6-aminohexanoate oligomer hydrolase [imported] - Brucella
melitensis (strain 16M)
gi|17985104|gb|AAL54140.1| ENDO-TYPE 6-AMINOHEXANOATE OLIGOMER HYDROLASE [Brucella melitensis
16M]
Length = 335
Score = 179 bits (455), Expect = 5e-44
Identities = 150/359 (41%), Positives = 188/359 (52%), Gaps = 64/359 (17%)
Query: 3 SITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDP 62
SITDV GI++GH+ G +V+L G VD RG APGTRETDLLDP
Sbjct: 8 SITDVPGIKLGHHTLTRRPT--------GCSVLLCEEGATAGVDVRGSAPGTRETDLLDP 59
Query: 63 ANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGW 122
N V+ V A+LL+GGSAYGLAAA GVMR+LEE+ G + GVVPIVP A++ DL VG +
Sbjct: 60 INFVQKVQAILLSGGSAYGLAAATGVMRYLEENNLGFEIGKGVVPIVPAAILMDLGVGDF 119
Query: 123 NCRPTADFGYSAC-AAAGVDVAVGTVGVGVGARAG-------ALKGGVGTASATLQ-SGV 173
+ RP + GY AC AA G +G G GA G A+KGG+GTAS + + +
Sbjct: 120 SVRPDEEAGYLACKAATAAPSGEGNIGAGAGATVGKMFGMDYAMKGGLGTASYKVPGTEI 179
Query: 174 TVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNT---- 229
VG + VNA G+V RAP + +I A A+ G NT
Sbjct: 180 VVGAIVAVNAVGDV-------------------RAPNSHRILAGARTEDGKGFRNTMAAI 220
Query: 230 ----------PFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFAL 279
NTTIG IA +A A ++IA AHDG ARTI P HT DGDT+FAL
Sbjct: 221 MQGHGVVKSGGANTTIGAIATNAPFGKAELKKIAGMAHDGFARTINPVHTMWDGDTIFAL 280
Query: 280 ATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQ--PVAGIPTYRD 336
+TG VTA+GA AA +A AV V+ A+ P +P +RD
Sbjct: 281 STGKA------------KDGQADVTAIGAIAASVMADAVARAVVQAESLPHLNLPAHRD 327
>gi|13470389|ref|NP_101957.1| hypothetical protein [Mesorhizobium loti]
gi|14021130|dbj|BAB47743.1| hypothetical protein [Mesorhizobium loti]
Length = 341
Score = 179 bits (455), Expect = 6e-44
Identities = 138/301 (45%), Positives = 168/301 (55%), Gaps = 20/301 (6%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N ITDV G+RVG+ DA L +G VT +L V V GGAPGTRETDLL+
Sbjct: 8 NLITDVAGLRVGN----SSDARLKSG----VTTILCDEPAVAGVQILGGAPGTRETDLLE 59
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
P NS+ + A++L+GGSA+GL AA GV L E G + VPIVP A++FDL GG
Sbjct: 60 PHNSIEAIHAVVLSGGSAFGLDAASGVQAALRERGVGFEVGGFRVPIVPAAILFDLRNGG 119
Query: 122 ---WN-CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGV 177
W P D GY A +A D +GTVG G GA LKGG+G+AS L +GVT+G
Sbjct: 120 DKDWGRYPPYRDLGYEAAQSAATDFQLGTVGAGTGALTAGLKGGLGSASTLLDTGVTIGA 179
Query: 178 LAVVNAAGNVVDPATGLPWMA-----DLVGEFALRAP-PAEQIAALAQLSSPLGA--FNT 229
LA VN G+V T W A D G +P PA+ L + T
Sbjct: 180 LAAVNPTGSVTVGRTRHLWAAPFEIGDEFGGLGYPSPMPADAKEILLKYRDKHAGKQMET 239
Query: 230 PFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPE 289
NTTI VIA DA L+ AA +R+A++AHDG R I P HTP DGD VFALATG + E
Sbjct: 240 GGNTTIAVIATDAVLTKAAAKRLAMSAHDGFVRAIWPTHTPADGDLVFALATGTSGIRLE 299
Query: 290 A 290
A
Sbjct: 300 A 300
>gi|23500102|ref|NP_699542.1| conserved hypothetical protein [Brucella suis 1330]
gi|23463695|gb|AAN33547.1| conserved hypothetical protein [Brucella suis 1330]
Length = 368
Score = 178 bits (451), Expect = 1e-43
Identities = 150/359 (41%), Positives = 188/359 (52%), Gaps = 64/359 (17%)
Query: 3 SITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDP 62
SITDV GI++GH+ G +V+L G VD RG APGTRETDLLDP
Sbjct: 41 SITDVPGIKLGHHTLTRRPT--------GCSVLLCEEGATAGVDVRGSAPGTRETDLLDP 92
Query: 63 ANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGW 122
N V+ V A+LL+GGSAYGLAAA GVMR+LEE+ G + GVVPIVP A++ DL VG +
Sbjct: 93 INFVQKVQAILLSGGSAYGLAAATGVMRYLEENNLGFEIGKGVVPIVPAAILMDLGVGDF 152
Query: 123 NCRPTADFGYSAC-AAAGVDVAVGTVGVGVGARAG-------ALKGGVGTASATLQ-SGV 173
+ RP + GY AC AA G +G G GA G A+KGG+GTAS + + +
Sbjct: 153 SVRPDEEAGYLACKAATAAPSGEGNIGAGAGATVGKMFGMDYAMKGGLGTASYKVPGTEI 212
Query: 174 TVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNT---- 229
VG + VNA G+V RAP + +I A A+ G NT
Sbjct: 213 VVGAIVAVNAVGDV-------------------RAPNSHRILAGARTEDGKGFRNTMAAI 253
Query: 230 ----------PFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFAL 279
NTTIG IA +A A ++IA AHDG ARTI P HT DGDT+FAL
Sbjct: 254 MQGHGVVKSGGANTTIGAIATNAPFGKAELKKIAGMAHDGFARTINPVHTMWDGDTIFAL 313
Query: 280 ATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQ--PVAGIPTYRD 336
+TG VTA+GA AA +A AV V+ A+ P +P +RD
Sbjct: 314 STGKA------------KDGQADVTAIGAIAASVMADAVARAVVQAESLPHLNLPAHRD 360
>gi|18310404|ref|NP_562338.1| conserved hypothetical protein [Clostridium perfringens]
gi|18145084|dbj|BAB81128.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 325
Score = 177 bits (450), Expect = 2e-43
Identities = 127/344 (36%), Positives = 174/344 (50%), Gaps = 38/344 (11%)
Query: 4 ITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA 63
ITD+ G ++GH Q + A G TV+L G G VD RGGAPGTRETDLL+P
Sbjct: 6 ITDIDGFKLGHAQDFEG--------ATGCTVLLCEEGASGGVDVRGGAPGTRETDLLNPM 57
Query: 64 NSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWN 123
V V A++L+GGSA+GL + GVM +LE G + VPIV GAV+FDL G
Sbjct: 58 EMVDKVHAIVLSGGSAFGLDSCSGVMEYLENKNVGFDVGVAKVPIVCGAVLFDLACGNPK 117
Query: 124 CRPTADFGYSAC--AAAGVDVAVGTVGVGVGARAG-------ALKGGVGTASATLQSG-V 173
RP + G AC + +D G +G G GA G A+KGG G S +Q G +
Sbjct: 118 IRPNKEMGLEACKNSETYLDSKNGNIGCGTGATVGKALNQKLAMKGGFG--SYAVQVGDL 175
Query: 174 TVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNT 233
VG + VN+ G++VDP +A + + E+ + LA S+P F NT
Sbjct: 176 KVGAIVGVNSLGDIVDPNNNNKIIAGGLSQDRNSFINIEE-SLLANYSNPKNVFKG--NT 232
Query: 234 TIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVP 293
TIG I + + A +IA A +G RTIRPAHT DGDT+F L++ V
Sbjct: 233 TIGCIVTNGDFNKAEANKIASMAQNGFGRTIRPAHTMFDGDTIFTLSSNKVKAD------ 286
Query: 294 AALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDM 337
+ VG AA + +A++ V A G +++D+
Sbjct: 287 ---------INVVGLLAAQVMEKAIIKAVKEADSSYGFLSHKDL 321
>gi|39936874|ref|NP_949150.1| Peptidase family T4 [Rhodopseudomonas palustris]
gi|39650731|emb|CAE29254.1| Peptidase family T4 [Rhodopseudomonas palustris CGA009]
Length = 349
Score = 176 bits (447), Expect = 5e-43
Identities = 146/347 (42%), Positives = 185/347 (53%), Gaps = 29/347 (8%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N ITDV G+RVGH D L A GVT +L V ++D RGG PG R+ LL+
Sbjct: 18 NLITDVAGVRVGHAH----DHKL----ASGVTAILFDKPAVASIDVRGGGPGIRDGALLE 69
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
P N+V +D L+GGSA+GL + GV WL E RG A+ + +PIVPGAV+FD+ GG
Sbjct: 70 PVNTVEQIDGFTLSGGSAFGLDSGGGVQAWLAERGRGFAIGNATIPIVPGAVVFDMINGG 129
Query: 122 ---W-NCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGV 177
W P D GY+A AAG A+G+VG G+GA LKGG+G+ASAT GVTVG
Sbjct: 130 DKAWGRFSPYRDLGYAAADAAGDSFALGSVGAGLGATTATLKGGLGSASATTPGGVTVGA 189
Query: 178 LAVVNAAGNVVDPATGLPWMADLV--GEF-ALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
+AVVNA G+ W A GEF L P + L A + NTT
Sbjct: 190 IAVVNAIGSATIGDGPWFWSAPFEQDGEFGGLGMPESFTPDMLKVRLKGAAAASAIENTT 249
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
+ + DA L+ +R+A+ A G AR I P H PLDGD VFA ATG V P AG
Sbjct: 250 LVAVVTDANLTKPQVKRLAMLAQTGFARAIYPVHAPLDGDVVFAAATGVKPVEPLAG--- 306
Query: 295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVA---GIPTYRDMF 338
+T +G AA+ +ARA+ GV A + P +RD F
Sbjct: 307 --------LTELGTIAANTVARAIARGVYEATALPFKDAQPAWRDRF 345
>gi|21325284|dbj|BAB99906.1| L-aminopeptidase/D-esterase [Corynebacterium glutamicum ATCC 13032]
Length = 320
Score = 176 bits (446), Expect = 6e-43
Identities = 142/340 (41%), Positives = 185/340 (54%), Gaps = 41/340 (12%)
Query: 4 ITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA 63
+ DV G +GH + D G +VV+ P G VD RGG PGTRETDLL+P
Sbjct: 18 LIDVAGFLLGHVTKGD----------TGCSVVIAPNGAFAGVDVRGGGPGTRETDLLEPH 67
Query: 64 NSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRG--VAMDSGVVPIVPGAVIFDLPVGG 121
NSV+ A++L GGSA+GLAAADGVM LE G V + +VPIVPGAVIFDL VG
Sbjct: 68 NSVQQAHAVVLCGGSAFGLAAADGVMTALENRGIGFPVRPEGPIVPIVPGAVIFDLLVGD 127
Query: 122 WNCRPTADFGYSAC--AAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLA 179
RPTA G A A AG G+VG G GA AG L+GG G +S + T+
Sbjct: 128 PKNRPTAADGEQAVENAFAGTHNGSGSVGAGTGATAGRLRGGFGQSSRRV-GKYTIAAGV 186
Query: 180 VVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIA 239
V N G VVD TG AL P + +L S NTTIGV+A
Sbjct: 187 VANPVGEVVDLTTG-----------ALFGRPEVMGVGVDKLKSAA----ETLNTTIGVVA 231
Query: 240 CDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPE 299
DA ++ A +R+A+ AHDGLAR +RP+H+P+DGDT FA+++G P L+
Sbjct: 232 TDAPVTKAQAKRLALVAHDGLARAVRPSHSPMDGDTFFAMSSG----DGSGVTPVELA-- 285
Query: 300 TQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFP 339
+ A AADC+ A++ +L A P G+ ++R++ P
Sbjct: 286 -----ELSAHAADCVQDAIIDAILTASPGLGLKSFRELLP 320
>gi|19553713|ref|NP_601715.1| L-aminopeptidase/D-esterase [Corynebacterium glutamicum ATCC 13032]
gi|41326694|emb|CAF21176.1| L-aminopeptidase/D-esterase [Corynebacterium glutamicum ATCC 13032]
Length = 304
Score = 174 bits (440), Expect = 3e-42
Identities = 142/340 (41%), Positives = 185/340 (54%), Gaps = 41/340 (12%)
Query: 4 ITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA 63
+ DV G +GH + D G +VV+ P G VD RGG PGTRETDLL+P
Sbjct: 2 LIDVAGFLLGHVTKGD----------TGCSVVIAPNGAFAGVDVRGGGPGTRETDLLEPH 51
Query: 64 NSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRG--VAMDSGVVPIVPGAVIFDLPVGG 121
NSV+ A++L GGSA+GLAAADGVM LE G V + +VPIVPGAVIFDL VG
Sbjct: 52 NSVQQAHAVVLCGGSAFGLAAADGVMTALENRGIGFPVRPEGPIVPIVPGAVIFDLLVGD 111
Query: 122 WNCRPTADFGYSAC--AAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLA 179
RPTA G A A AG G+VG G GA AG L+GG G +S + T+
Sbjct: 112 PKNRPTAADGEQAVENAFAGTHNGSGSVGAGTGATAGRLRGGFGQSSRRV-GKYTIAAGV 170
Query: 180 VVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIA 239
V N G VVD TG AL P + +L S NTTIGV+A
Sbjct: 171 VANPVGEVVDLTTG-----------ALFGRPEVMGVGVDKLKSAA----ETLNTTIGVVA 215
Query: 240 CDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPE 299
DA ++ A +R+A+ AHDGLAR +RP+H+P+DGDT FA+++G P L+
Sbjct: 216 TDAPVTKAQAKRLALVAHDGLARAVRPSHSPMDGDTFFAMSSG----DGSGVTPVELA-- 269
Query: 300 TQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFP 339
+ A AADC+ A++ +L A P G+ ++R++ P
Sbjct: 270 -----ELSAHAADCVQDAIIDAILTASPGLGLKSFRELLP 304
>gi|38234425|ref|NP_940192.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
gi|38200688|emb|CAE50384.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length = 310
Score = 173 bits (438), Expect = 5e-42
Identities = 149/335 (44%), Positives = 191/335 (57%), Gaps = 39/335 (11%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
M + DV G+ VGH D G TVV+ P +GAVD RGG PGTRETDLL
Sbjct: 1 MGGLIDVPGVLVGHRSLGD----------TGCTVVVMPESAIGAVDVRGGGPGTRETDLL 50
Query: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV-VPIVPGAVIFDLPV 119
+P N+V+ V A++L+GGSA+GLA ADGVMR L+ G + GV VPIVPGAVIFDL V
Sbjct: 51 EPHNTVQRVHAVVLSGGSAFGLATADGVMRALDSRGIGFPVPGGVSVPIVPGAVIFDLLV 110
Query: 120 GGWNCRPTADFGYSACAAA---GVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVG 176
G RPTA G +A A G AVG+VG G A AG L+GG G AS V V
Sbjct: 111 GDPYHRPTAADGEAAVRDAFDGGSAAAVGSVGAGCAATAGVLRGGFGQASQRAGDYV-VA 169
Query: 177 VLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIG 236
V N G+VVDP +G W A P ++ + S L T NTTIG
Sbjct: 170 AGVVANPVGSVVDPRSGRLW-----------ADPDVRVD--CEKFSQLKGLETKLNTTIG 216
Query: 237 VIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAAL 296
VIA DA ++ A +R+A+ HDG+A IRPAH+PLDGDT+FA++TG AGV
Sbjct: 217 VIATDAPVTKAQAQRLAMVGHDGIAVAIRPAHSPLDGDTLFAISTG-----DGAGV---- 267
Query: 297 SPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGI 331
+ + + AAA+ +A+A+++ V+NA G+
Sbjct: 268 --DVDTLAQLSRAAAEVVAQAIVSAVVNATSAYGM 300
>gi|25028963|ref|NP_739017.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|23494250|dbj|BAC19217.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 317
Score = 172 bits (437), Expect = 7e-42
Identities = 152/344 (44%), Positives = 193/344 (56%), Gaps = 42/344 (12%)
Query: 4 ITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA 63
+ DV GI +GH D GVTVV+ P G VD RGG PGTRETDLL+P
Sbjct: 8 LCDVPGIHLGHVTSGD----------TGVTVVVAPGGAFAGVDVRGGGPGTRETDLLEPH 57
Query: 64 NSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAM-----DSGVVPIVPGAVIFDLP 118
N+V+ V A+ L GGSAYGLAAADGVM LEE G + +VPIVP AVIFDL
Sbjct: 58 NTVQQVHAVALCGGSAYGLAAADGVMYALEERGIGFPVLGPDRPGPIVPIVPAAVIFDLL 117
Query: 119 VGGWNCRPTADFGYSAC--AAAGVDVAV-GTVGVGVGARAGALKGGVGTASATLQSGVTV 175
VG RPT + G +A A AG V G++G G GA AG L+GG G AS T+ V V
Sbjct: 118 VGDPTNRPTREHGLTAVDHALAGRQREVSGSIGAGTGATAGHLRGGFGQASTTVGEFV-V 176
Query: 176 GVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTI 235
V N G VVDP TG + A PA + LA + P NTTI
Sbjct: 177 AAGIVANPVGEVVDPTTGTLYGAP--------GRPAVDVDKLAAVPHPAA----DLNTTI 224
Query: 236 GVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAA 295
GVIA +A ++ A +R+A+ HDGLAR +RP+H+P+DGDT+FAL+TG
Sbjct: 225 GVIATNAPVTKAQAKRLALTGHDGLARAVRPSHSPMDGDTLFALSTG-----------DG 273
Query: 296 LSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFP 339
+ L+ ++ AAAADC+ A++ V +A P G+ TYR++ P
Sbjct: 274 TGVDATLLASLCAAAADCVQNAIVDAVTSASPGHGLTTYRELIP 317
>gi|21221628|ref|NP_627407.1| conserved hypothetical protein SCE22.10 [Streptomyces coelicolor
A3(2)]
gi|7799513|emb|CAB90977.1| conserved hypothetical protein SCE22.10 [Streptomyces coelicolor
A3(2)]
Length = 348
Score = 171 bits (433), Expect = 2e-41
Identities = 170/359 (47%), Positives = 211/359 (58%), Gaps = 32/359 (8%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPG-TVGAVDCRGGAPGTRETDL 59
++++TDV G+ VGH R G GW G TVVL P G V VD RGG PGT+ETD
Sbjct: 3 VDALTDVAGLLVGHATRT------GDGWLTGTTVVLAPEGGAVAGVDVRGGGPGTKETDA 56
Query: 60 LDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMD---SGVVPIVPGAVIFD 116
LDP N V+ V A++L GGSAYGL AA GVM WLEE RGV + + VVP+VP A +FD
Sbjct: 57 LDPRNLVQKVQAVVLTGGSAYGLDAASGVMAWLEERGRGVRVGPDPAHVVPVVPAACVFD 116
Query: 117 LPVGG-WNCRPTADFGY-----SACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ 170
L GG + RP A GY + +A G VA G VG G GA GALKGGVGTAS L
Sbjct: 117 LGRGGDFRARPDAVTGYAAVAAAHASAPGAAVAEGCVGAGTGAVVGALKGGVGTASTVLD 176
Query: 171 SGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNT- 229
SG+TV L V NAAG+V DP TG+ + +L + P E A + + + A N
Sbjct: 177 SGITVAALVVANAAGSVTDPETGVLY-GELFRGGRVEYPAPEVHEAAGRRLAEVAARNAP 235
Query: 230 -PFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPP 288
P NTT+ V+A DA LS A +++A AHDG+AR +RP H DGDTVFALATG P
Sbjct: 236 PPLNTTLAVVATDAGLSKAQAQKLAGTAHDGIARAVRPVHLLSDGDTVFALATG--VRPL 293
Query: 289 EAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG----IPTYRDMFPGAFG 343
+AG P AL+ V AA AD + RA++ V A+PV G P+Y ++ G G
Sbjct: 294 DAGQPLALN-------EVLAAGADVVTRAIVRAVRAAEPVDGPGGAWPSYGGLYGGPDG 345
>gi|15965508|ref|NP_385861.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
gi|15074689|emb|CAC46334.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 334
Score = 165 bits (418), Expect = 9e-40
Identities = 135/296 (45%), Positives = 163/296 (55%), Gaps = 19/296 (6%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N ITDV G+ VG+ + + + GVT VL P AV GGAPGTRETDLL
Sbjct: 7 NLITDVPGLLVGNAEDIRLKS--------GVTAVLCDPPATAAVQVLGGAPGTRETDLLA 58
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
P N+V+ VDA++L+GGSA+GL AA GV L E RG A+ VPIVP A++FDL GG
Sbjct: 59 PHNTVQAVDAIVLSGGSAFGLDAASGVQAALREMGRGFAVGPHRVPIVPAAILFDLANGG 118
Query: 122 ---WN-CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGV 177
W P D GY A A D G+ G G GA KGG+G+AS L +G+TVG
Sbjct: 119 DKDWGRYAPYRDLGYQAARAVSADFGTGSTGAGTGALTATFKGGLGSASTVLSNGITVGA 178
Query: 178 LAVVNAAGNVVDPATGLPW-----MADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFN 232
L VNA G+ T W M D G P + AA A T N
Sbjct: 179 LVAVNAIGSATVGDTRHFWAAPFEMDDEFGGLGQPTPWPQDAAAPRFKFRERQASAT--N 236
Query: 233 TTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPP 288
TTI VIA DA L+ A +R+AIAAHDG +R + P+HTPLDGD VFAL+TG P
Sbjct: 237 TTIAVIATDALLTKAEAKRLAIAAHDGFSRALWPSHTPLDGDLVFALSTGTSGKAP 292
>gi|27380789|ref|NP_772318.1| blr5678 [Bradyrhizobium japonicum]
gi|27353954|dbj|BAC50943.1| blr5678 [Bradyrhizobium japonicum USDA 110]
Length = 332
Score = 164 bits (415), Expect = 2e-39
Identities = 141/349 (40%), Positives = 187/349 (53%), Gaps = 29/349 (8%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N +TD+ G+RVGH + A A G T ++ V A+D RGG PGTRE LLD
Sbjct: 3 NLLTDIAGVRVGHAE--------DAKVASGTTAIIFDSPAVAAIDVRGGGPGTREDALLD 54
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
AN+V VDA+ L+GGSA+GL GV WL E RG + ++PIVPGA++FDL GG
Sbjct: 55 LANTVERVDAIALSGGSAFGLDTGGGVQAWLAEQGRGHRVREALIPIVPGAILFDLLNGG 114
Query: 122 WNC----RPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGV 177
P D GY+A AAAG D A+G+VG G+GA KGG+G+ASA GV V
Sbjct: 115 DKAWGRFSPYRDLGYAAAAAAGTDFAIGSVGAGLGATTATFKGGLGSASAVTPDGVKVAA 174
Query: 178 LAVVNAAGNVVDPATGLPWMA--DLVGEFALRAPPAEQIAALAQLSSPLG-AFNTPFNTT 234
+ VNA G+V W A ++ GE+ R P + + ++ G A + NTT
Sbjct: 175 IVAVNAVGSVTVGNGPWFWAAPFEVDGEYGGRGLPDKFTDDMLRMRIKGGPAASARENTT 234
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
IG + DA L+ +R+A+ AH G AR I P H P DGD ++A AT + P G
Sbjct: 235 IGAVVTDAVLTKPQAKRLAMIAHTGFARAIYPVHAPTDGDVLYAAATCEKPIEPLVG--- 291
Query: 295 ALSPETQLVTAVGAAAADCLARAVLAGVL--NAQPVAGI-PTYRDMFPG 340
+T +G AA+ +ARA+ GV A P G P +RD F G
Sbjct: 292 --------LTELGTVAANVVARAIARGVYCATALPFGGAQPAWRDRFGG 332
>gi|30577697|emb|CAD18988.1| putative cysteine transferase [Streptomyces cattleya]
Length = 399
Score = 162 bits (411), Expect = 7e-39
Identities = 172/370 (46%), Positives = 205/370 (55%), Gaps = 39/370 (10%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPG-TVGAVDCRGGAPGTRETDLL 60
N +TDV G+RVGH R G GW GVTVVL PPG V AVD RGG PGTRETD L
Sbjct: 33 NGLTDVPGVRVGHAGRT------GDGWLTGVTVVLAPPGGAVAAVDVRGGGPGTRETDAL 86
Query: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGV---AMDSGVVPIVPGAVIFDL 117
DP N V+ +DA++L GGSA+GL AA GV WLEE RG A S VVP+VP A +FDL
Sbjct: 87 DPRNLVQTIDAVVLTGGSAFGLDAAGGVAAWLEEQGRGFPVGADPSQVVPVVPAAALFDL 146
Query: 118 PVGG-WNCRPTADFG-----YSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQS 171
GG W RP A G +A G V G VG G GA G LKGG+GTAS L S
Sbjct: 147 GRGGTWRARPDAALGRAAVEAAAARPEGDPVEQGGVGAGTGAVVGGLKGGIGTASVVLDS 206
Query: 172 GVTVGVLAVVNAAGNVVDPATGLPWMA--DLVGEFALRAPP------------AEQIAAL 217
G TV LA VNAAG+ VDPATG+ + A L GEFA P A A
Sbjct: 207 GATVAALAAVNAAGSAVDPATGVLYGARTGLPGEFAGYGVPDAIGADTHARARARLAEAA 266
Query: 218 AQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVF 277
+ + NTT+ V+A DA L+ A +++A AHDGLAR +RP H DGDTVF
Sbjct: 267 EETARRRAGGAATLNTTLAVVATDATLTRAQAQKLAGTAHDGLARAVRPVHLLSDGDTVF 326
Query: 278 ALATGAVAVPPE-----AGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNA----QPV 328
AL+TG + P+ A + E + V AA AD L RAV+ VL A P
Sbjct: 327 ALSTGRRPLLPDRPDATAARAFGVHLEAGALNEVLAAGADVLTRAVVHAVLAATGVDTPG 386
Query: 329 AGIPTYRDMF 338
P+YR+++
Sbjct: 387 GVHPSYRELY 396
>gi|16126426|ref|NP_420990.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|25375720|pir||B87520 conserved hypothetical protein CC2187 [imported] - Caulobacter
crescentus
gi|13423688|gb|AAK24158.1| conserved hypothetical protein [Caulobacter crescentus CB15]
Length = 330
Score = 157 bits (398), Expect = 2e-37
Identities = 138/332 (41%), Positives = 170/332 (51%), Gaps = 27/332 (8%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N ITDV G++VG + GVTVVL P AVD RGG P RETD L
Sbjct: 8 NLITDVPGLKVGCVE--------DEAVRTGVTVVLCPEAWTAAVDVRGGGPAVRETDTLR 59
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV--VPIVPGAVIFDLPV 119
P NS A+ +GGS +GL AADGV L G+ + +G +PIVP A + DL
Sbjct: 60 PENSFSKAHAICFSGGSVFGLGAADGVASALSNRDVGLRITAGTPAIPIVPAACLHDLSN 119
Query: 120 GG---WNCRPT-ADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTV 175
GG W P G A AAG D +G VG G GA AG GG+G+AS L G+ V
Sbjct: 120 GGDKAWGLTPPYRALGMKAVEAAGEDFPLGPVGAGRGAMAGLRPGGLGSASLDLGDGLIV 179
Query: 176 GVLAVVNAAGN--VVDPATGLPWMADLVGEFALRAPP--AEQIAALAQLSSPLGAFNTPF 231
L N G+ + D T W ++ GEF R P A I L S
Sbjct: 180 AALVAANPVGSAYMADGETFWAWPFEIDGEFGGRRPGTMAPAIEPLPDDSKLGARLAAGA 239
Query: 232 NTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAG 291
NTT+ ++A A LS A +R+A+ AHDG+AR +RP HTP DGD VFALA+GA
Sbjct: 240 NTTLALVATTADLSTAEAQRMAMMAHDGMARAVRPCHTPFDGDVVFALASGA-------- 291
Query: 292 VPAALSP-ETQLVTAVGAAAADCLARAVLAGV 322
P P + L T +G+AAADCLARA+ V
Sbjct: 292 KPLGEDPMRSVLRTRIGSAAADCLARAMARAV 323
>gi|29830227|ref|NP_824861.1| hypothetical protein [Streptomyces avermitilis MA-4680]
gi|29607338|dbj|BAC71396.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length = 342
Score = 144 bits (364), Expect = 2e-33
Identities = 149/339 (43%), Positives = 192/339 (56%), Gaps = 23/339 (6%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
++++TDV G+RVGH + G V+ P G V AVD RGG PGT+ETD L
Sbjct: 3 VDALTDVAGLRVGH-----ATRTGGGWLTGTTVVLAPEGGAVAAVDVRGGGPGTKETDAL 57
Query: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMD---SGVVPIVPGAVIFDL 117
DP N V+ V+A++L GGSAYGL +A GVM WLEE RRGV + + VVP+VP A +FDL
Sbjct: 58 DPRNLVQRVEAVVLTGGSAYGLDSASGVMAWLEEQRRGVRVGPDPAHVVPVVPAACVFDL 117
Query: 118 PVGG-WNCRPTADFG-----YSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQS 171
GG + RP A G +A + G V G VG G GA G +KGGVGTAS L S
Sbjct: 118 GRGGDFRARPDAATGRAAVEAAAASEPGAPVPEGCVGAGTGAVVGQVKGGVGTASTVLGS 177
Query: 172 GVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPF 231
G+TV L V NAAG+ VDP TG+ + G A + A + P
Sbjct: 178 GITVAALVVANAAGSTVDPETGVLYGELFQGRVVYPADGVHEAARRRLAETAAKNAPPPL 237
Query: 232 NTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAG 291
NTT+ V+A DA L+ A +++A AHDG+AR +RP H DGDTVF LATGA +P ++
Sbjct: 238 NTTLAVVATDAELTKAQAQKLAGTAHDGIARAVRPVHLLSDGDTVFTLATGAHPLPSDS- 296
Query: 292 VPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
P AL+ V AA AD + RA++ V A+ G
Sbjct: 297 -PLALN-------EVLAAGADVVTRAIVRAVRAAESADG 327
>gi|17936440|ref|NP_533230.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58
(U. Washington)]
gi|25375726|pir||AD2891 conserved hypothetical protein Atu2565 [imported] - Agrobacterium
tumefaciens (strain C58, Dupont)
gi|17741058|gb|AAL43546.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58
(U. Washington)]
Length = 334
Score = 139 bits (350), Expect = 9e-32
Identities = 146/351 (41%), Positives = 183/351 (52%), Gaps = 32/351 (9%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N +TD+ GI VG+ D SLG+G VT ++ V + GGAPG R+T LLD
Sbjct: 6 NLLTDIDGILVGNVT----DLSLGSG----VTAIVFEKPAVASGSVLGGAPGGRDTGLLD 57
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
P+ +V VDAL+L+GGSA+GL AA GV L E RG+ + S VPIVP A++ D+ GG
Sbjct: 58 PSMTVETVDALVLSGGSAFGLDAAGGVQAGLREIGRGLQVGSTRVPIVPQAILMDMLNGG 117
Query: 122 ---WNCR-PTADFGYSACAAAGVD-VAVGTVGVGVGARAGALKGGVGTASATLQSGVTVG 176
W P + GY+A AAG D +GT G G GA KGG+G+ASA G V
Sbjct: 118 NKDWGLHSPYREMGYAAFKAAGRDPFELGTAGAGTGATTATFKGGLGSASAISSGGYKVA 177
Query: 177 VLAVVNAAGNVVDPATGLPWMA--DLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
+ VNA G+ + W A ++ GEF PA A L L N TT
Sbjct: 178 AIVAVNALGSATVGTSRHFWSAPFEVHGEFGDHGFPARFTADDTALR--LKGVNLT-ATT 234
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
IG + DA L+ A R++I AHDGLAR + PAH P DGDT+FA ATG P E G A
Sbjct: 235 IGAVVTDAVLTKAQAHRLSIMAHDGLARAVLPAHLPSDGDTMFAAATG--DKPQEGG--A 290
Query: 295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQ--PVAGIP-TYRDMFPGAF 342
+ L T V +ARAV GV A PV G YRD+ F
Sbjct: 291 HFAELCYLATIV-------MARAVARGVYEATALPVDGAQRAYRDIHGRGF 334
>gi|15889823|ref|NP_355504.1| AGR_C_4649p [Agrobacterium tumefaciens]
gi|25375725|pir||H97666 hypothetical 33.9K protein rv1333 [imported] - Agrobacterium
tumefaciens (strain C58, Cereon)
gi|15157757|gb|AAK88289.1| AGR_C_4649p [Agrobacterium tumefaciens str. C58 (Cereon)]
Length = 355
Score = 138 bits (347), Expect = 2e-31
Identities = 146/351 (41%), Positives = 183/351 (52%), Gaps = 32/351 (9%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N +TD+ GI VG+ D SLG+G VT ++ V + GGAPG R+T LLD
Sbjct: 27 NLLTDIDGILVGNVT----DLSLGSG----VTAIVFEKPAVASGSVLGGAPGGRDTGLLD 78
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
P+ +V VDAL+L+GGSA+GL AA GV L E RG+ + S VPIVP A++ D+ GG
Sbjct: 79 PSMTVETVDALVLSGGSAFGLDAAGGVQAGLREIGRGLQVGSTRVPIVPQAILMDMLNGG 138
Query: 122 ---WNCR-PTADFGYSACAAAGVD-VAVGTVGVGVGARAGALKGGVGTASATLQSGVTVG 176
W P + GY+A AAG D +GT G G GA KGG+G+ASA G V
Sbjct: 139 NKDWGLHSPYREMGYAAFKAAGRDPFELGTAGAGTGATTATFKGGLGSASAISSGGYKVA 198
Query: 177 VLAVVNAAGNVVDPATGLPWMA--DLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
+ VNA G+ + W A ++ GEF PA A L L N TT
Sbjct: 199 AIVAVNALGSATVGTSRHFWSAPFEVHGEFGDHGFPARFTADDTALR--LKGVNLT-ATT 255
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
IG + DA L+ A R++I AHDGLAR + PAH P DGDT+FA ATG P E G A
Sbjct: 256 IGAVVTDAVLTKAQAHRLSIMAHDGLARAVLPAHLPSDGDTMFAAATG--DKPQEGG--A 311
Query: 295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQ--PVAGIP-TYRDMFPGAF 342
+ L T V +ARAV GV A PV G YRD+ F
Sbjct: 312 HFAELCYLATIV-------MARAVARGVYEATALPVDGAQRAYRDIHGRGF 355
>gi|15805808|ref|NP_294506.1| conserved hypothetical protein [Deinococcus radiodurans]
gi|7471369|pir||B75476 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gi|6458494|gb|AAF10360.1| conserved hypothetical protein [Deinococcus radiodurans]
Length = 310
Score = 119 bits (297), Expect = 1e-25
Identities = 118/290 (40%), Positives = 148/290 (51%), Gaps = 36/290 (12%)
Query: 3 SITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDP 62
++T + G +VGH+ DP A G V+ PP G V + G +P TRE LL P
Sbjct: 17 TLTAIPGFQVGHWT--DPLAQTGC-----TVVLCPPEGAVASASFIGPSPATREGVLLSP 69
Query: 63 ANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGW 122
V V ALLL GGSA+GLAAA GV+R LEE G G VPIVP AVI+DL VG
Sbjct: 70 EKKVERVHALLLTGGSAFGLAAATGVVRVLEERGIGHETAFGRVPIVPAAVIYDLGVGNP 129
Query: 123 NCRPTADFG-YSACAAAGVDVAVGTVGVGVGARAGA----LKGGVGTASATLQSGVTVGV 177
RP G +A AA+ V G VG G GA AG G + +SGV V
Sbjct: 130 RVRPGEIEGEAAARAASSAPVERGQVGAGTGATAGKYLGGGVPGGLGSVCLERSGVRVAA 189
Query: 178 LAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPF---NTT 234
LAVVN G+V+D G+ L P + P+ A TP NTT
Sbjct: 190 LAVVNPVGDVLDERGGV-----------LAGPG----------TGPVAAAFTPGDVENTT 228
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAV 284
+ +A + AL+ A CRR+A AA LAR I P+HT DGD+ F L++ A+
Sbjct: 229 LVAVATEHALTKAECRRLADAAQTALARVIHPSHTAWDGDSAFVLSSAAL 278
>gi|15898366|ref|NP_342971.1| Conserved hypothetical protein [Sulfolobus solfataricus]
gi|25375721|pir||B90313 conserved hypothetical protein [imported] - Sulfolobus solfataricus
gi|13814773|gb|AAK41761.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 282
Score = 112 bits (280), Expect = 9e-24
Identities = 95/291 (32%), Positives = 141/291 (48%), Gaps = 44/291 (15%)
Query: 7 VGGIRVGHYQRLDPDASLGAGWACGVTVVLPP-PGTVGAVDCRGGAPGTRETDLLDPAN- 64
+ GI+VG Y + GVTV+L + RGG+P T TDLL P +
Sbjct: 5 INGIKVGGYTDEKSKS--------GVTVILSEIENNTAGISQRGGSPATLGTDLLRPKHR 56
Query: 65 SVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV-VPIVPGAVIFDLPVGGWN 123
+ V+A++L G S +G+ D V+ L E G + + +PIV A IFD
Sbjct: 57 GNQSVNAIVLTGRSVFGIRVVDAVLMKLFELGVGFKISQNLKIPIVVSASIFDFYDN--T 114
Query: 124 CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ-------SGVTVG 176
PT D+GY+A + G D+ +G G GA G LKG + A + Q + + +G
Sbjct: 115 IMPTPDWGYNAMSNLGYDIPIGRYWAGRGATVGKLKG-IKYAKPSGQGYYEIENNNLKIG 173
Query: 177 VLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIG 236
V++VVN+ GN+ D L LVGE E+ NTP TT+G
Sbjct: 174 VISVVNSIGNIYDEKGEL-----LVGE------ETEEFK-----------INTP-GTTLG 210
Query: 237 VIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVP 287
V+ ++ L+ + R+A +A +G + I+P + LDGDTVF +AT + VP
Sbjct: 211 VVITNSKLNNSDACRVASSAENGFSSVIKPYNLSLDGDTVFTIATNEMEVP 261
>gi|423943|pir||A47039 nylon oligomer-degrading enzyme EIII nylC - Flavobacterium sp
gi|216839|dbj|BAA01528.1| endotype 6-aminohexanoate-oligomer hydrolase [Flavobacterium sp.]
gi|488341|dbj|BAA05088.1| endo-type 6-aminohexanoate oligomer hydrolase [Flavobacterium sp.]
Length = 355
Score = 77.0 bits (188), Expect = 5e-13
Identities = 100/318 (31%), Positives = 141/318 (44%), Gaps = 40/318 (12%)
Query: 20 PDASLGAGW----ACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSVRFVDALLLA 75
P S+GA G TV+ P G AVD RGGA G + F A+ LA
Sbjct: 56 PGVSIGAAHYEEGPTGATVIHIPAGARTAVDARGGAVGL--------SGGYDFNHAICLA 107
Query: 76 GGSAYGLAAADGVMRWLEE---HRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGY 132
GG+ YGL A GV L E HR G A + +V AVI+D ++ R TA +
Sbjct: 108 GGAGYGLEAGAGVSDALLERLEHRTGFAE----LQLVSSAVIYD-----FSARSTAVYPD 158
Query: 133 SACAAAGVDVAV------GTVGVGVGARAGAL---KGGVGTASATLQSGVTVGVLAVV-- 181
A A ++ AV G G G+ A AG + + + A + V +LAVV
Sbjct: 159 KALGRAALEFAVPGEFPQGRAGAGMSASAGKVDWDRTEITGQGAAFRRLGDVRILAVVVP 218
Query: 182 NAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACD 241
N G +VD A + R P + A A+ P+ NTTI I +
Sbjct: 219 NPVGVIVDRAGTVVRGNYDAQTGVRRHPVFDYQEAFAEQVPPV---TEAGNTTISAIVTN 275
Query: 242 AALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQ 301
+SP + A H + R I+P HT +DGDT+FA+ T + +P G ++ +
Sbjct: 276 VRMSPVELNQFAKQVHSSMHRGIQPFHTDMDGDTLFAVTTDEIDLPTTPG--SSRGRLSV 333
Query: 302 LVTAVGAAAADCLARAVL 319
TA+GA A++ + AVL
Sbjct: 334 NATALGAIASEVMWDAVL 351
>gi|23009700|ref|ZP_00050653.1| COG3191: L-aminopeptidase/D-esterase [Magnetospirillum
magnetotacticum]
Length = 106
Score = 62.0 bits (149), Expect = 1e-08
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 234 TIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAV 284
T+ V+A DAAL+ A +R+A+ A DGLAR I PAHTPLDGD VFA+ATGAV
Sbjct: 7 TLAVVATDAALTKAQAKRLAVVAQDGLARAIHPAHTPLDGDVVFAVATGAV 57
>gi|23061446|ref|ZP_00086291.1| COG3191: L-aminopeptidase/D-esterase [Pseudomonas fluorescens
PfO-1]
Length = 372
Score = 55.8 bits (133), Expect = 1e-06
Identities = 92/302 (30%), Positives = 122/302 (40%), Gaps = 34/302 (11%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
+N+ITDV G+RVGH AS G GVT++ P G+ A C G
Sbjct: 20 LNAITDVPGVRVGHSNVRGRSAS-GRDICSGVTLIEPRAGSTNAQPCFAGVHVLNGNGDA 78
Query: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMR-WLEEHRRGVAMDSGVV----PIVPGAVIF 115
+R +A LL A+ + GV+R L E R D G + P+V
Sbjct: 79 TGLEWIR--EAGLLTSPIAFTNTHSLGVVRDALIELDRAQQPDDGRLYWNMPVVLETFDG 136
Query: 116 DL-PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATL---QS 171
L + G++ +P + A G V G VG G G KGG+GTAS L Q
Sbjct: 137 LLNDINGFHVKPKHVAEAMSNAVDG-PVQEGAVGGGSGMICHEFKGGIGTASRRLSKAQG 195
Query: 172 GVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTP- 230
G TVG + N G P VG + + Q+ SP + P
Sbjct: 196 GWTVGAIVQANHGIRSELRVDGYP-----VGRY------------MEQVDSPFLRASLPH 238
Query: 231 --FNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPP 288
+ + +A DA L P C R+A A GLART + GD A ATG +PP
Sbjct: 239 PGMGSIVVALATDAPLLPHQCTRLAQRASLGLART-GGGNEDHSGDIFIAFATGNGHIPP 297
Query: 289 EA 290
A
Sbjct: 298 AA 299
>gi|32041534|ref|ZP_00139117.1| COG3191: L-aminopeptidase/D-esterase [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 366
Score = 52.4 bits (124), Expect = 1e-05
Identities = 93/301 (30%), Positives = 118/301 (39%), Gaps = 42/301 (13%)
Query: 2 NSITDVGGIRVGHY---QRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETD 58
N+ITDV G+RVGH QR+D G GVT+V P G C G
Sbjct: 19 NAITDVPGVRVGHSTLNQRID-----GRQVRTGVTLVQPRAGAARLQPCFAGCHVLNGNG 73
Query: 59 LLDPANSVRFVDALLLAGGSAYGLAAADGVMR-WLEEHRRGVAMDSGVVPIVPGAVIFDL 117
+R +A LL A + G +R L R DSG+ +P V+ +
Sbjct: 74 DATGLEWIR--EAGLLTTPIAITNTHSVGAVRDALIAEERAELGDSGLYWCMP--VVMET 129
Query: 118 PVGGWNCRPTADFGYS------ACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATL-- 169
G N G ACA +G V G+VG G G KGG+G+AS L
Sbjct: 130 FDGLLNDIWGQHVGARQVGEALACAESG-PVREGSVGGGTGMICHEFKGGIGSASRRLPA 188
Query: 170 -QSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFN 228
Q G TVG L N G P VG L + SP
Sbjct: 189 EQGGWTVGALVQANHGQRRELRVDGYP-----VGR------------RLGDIPSPFSEEG 231
Query: 229 TP-FNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVP 287
TP + + ++A DA L P C+R+A A G+ART GD A ATG +P
Sbjct: 232 TPGMGSIVVILATDAPLLPHQCQRLAQRASIGIARTGGGTEDS-SGDVFLAFATGNQDLP 290
Query: 288 P 288
P
Sbjct: 291 P 291
>gi|15596683|ref|NP_250177.1| hypothetical protein [Pseudomonas aeruginosa PA01]
gi|11349220|pir||G83460 hypothetical protein PA1486 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gi|9947440|gb|AAG04875.1| hypothetical protein PA1486 [Pseudomonas aeruginosa PAO1]
Length = 366
Score = 52.4 bits (124), Expect = 1e-05
Identities = 93/301 (30%), Positives = 118/301 (39%), Gaps = 42/301 (13%)
Query: 2 NSITDVGGIRVGHY---QRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETD 58
N+ITDV G+RVGH QR+D G GVT+V P G C G
Sbjct: 19 NAITDVPGVRVGHSTLNQRID-----GRQVRTGVTLVQPRAGAARLQPCFAGCHVLNGNG 73
Query: 59 LLDPANSVRFVDALLLAGGSAYGLAAADGVMR-WLEEHRRGVAMDSGVVPIVPGAVIFDL 117
+R +A LL A + G +R L R DSG+ +P V+ +
Sbjct: 74 DATGLEWIR--EAGLLTTPIAITNTHSVGAVRDALIAEERAELGDSGLYWCMP--VVMET 129
Query: 118 PVGGWNCRPTADFGYS------ACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATL-- 169
G N G ACA +G V G+VG G G KGG+G+AS L
Sbjct: 130 FDGLLNDIWGQHVGARQVGEALACAESG-PVREGSVGGGTGMICHEFKGGIGSASRRLPA 188
Query: 170 -QSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFN 228
Q G TVG L N G P VG L + SP
Sbjct: 189 EQGGWTVGALVQANHGQRRELRVDGYP-----VGR------------RLGDIPSPFSEEG 231
Query: 229 TP-FNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVP 287
TP + + ++A DA L P C+R+A A G+ART GD A ATG +P
Sbjct: 232 TPGMGSIVVILATDAPLLPHQCQRLAQRASIGIARTGGGTEDS-SGDVFLAFATGNQDLP 290
Query: 288 P 288
P
Sbjct: 291 P 291
>gi|22984022|ref|ZP_00029183.1| COG3191: L-aminopeptidase/D-esterase [Burkholderia fungorum]
Length = 536
Score = 50.4 bits (119), Expect = 5e-05
Identities = 68/203 (33%), Positives = 92/203 (45%), Gaps = 18/203 (8%)
Query: 134 ACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSG---VTVGVLAVVNAAGNVVDP 190
A AAAG DVA G+VG G G LKGG+G AS + + TVG L + N +
Sbjct: 322 AYAAAGPDVAGGSVGAGRGMSCFDLKGGIGNASRVVSAAGRSYTVGALVLANFGRLPMLT 381
Query: 191 ATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACR 250
G+P L A RA AE A L S A + I ++A DA L R
Sbjct: 382 IDGMP----LGRALAERADNAEAAALL----SATPATQPEQGSIIMIVATDAPLDARQLR 433
Query: 251 RIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAG---VPAALSPETQLVTAVG 307
R+++ A GLART + GD A +T A VP A +P ++ E + +
Sbjct: 434 RLSLRAAAGLART-GSVYGHGSGDIALAFST-AYTVPHGADFVTLPPLVADER--LDPLF 489
Query: 308 AAAADCLARAVLAGVLNAQPVAG 330
A AD + +A+L + A V G
Sbjct: 490 RACADSVEQAILDALWRAASVTG 512
>gi|22975947|ref|ZP_00021868.1| COG3191: L-aminopeptidase/D-esterase [Ralstonia metallidurans]
Length = 352
Score = 47.4 bits (111), Expect = 4e-04
Identities = 64/203 (31%), Positives = 87/203 (42%), Gaps = 30/203 (14%)
Query: 133 SACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPAT 192
SA AAA VDVA G VG G G + +KGG+GTAS + G TVG L + N
Sbjct: 157 SALAAASVDVAQGAVGAGRGMSSFGVKGGIGTAS-RIAGGYTVGALVLSNFGTPDSLIYG 215
Query: 193 GLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRI 252
G A L G+ P + + I ++A DA L R+
Sbjct: 216 GRLLGAALAGQLRQEIVPEK-------------------GSIIMIVATDAPLDARQLGRL 256
Query: 253 AIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLV-----TAVG 307
++ A GLART GD A +T A VP A VP P Q+V +
Sbjct: 257 SLRAGAGLART-GSVFGHGSGDIALAFST-AYTVPHLADVPM---PAVQMVHETRLDPLF 311
Query: 308 AAAADCLARAVLAGVLNAQPVAG 330
AAAD + +A++ + + + V G
Sbjct: 312 RAAADSVEQAIVNALWHGETVHG 334
>gi|20807555|ref|NP_622726.1| L-aminopeptidase/D-esterase [Thermoanaerobacter tengcongensis]
gi|20516090|gb|AAM24330.1| L-aminopeptidase/D-esterase [Thermoanaerobacter tengcongensis]
Length = 364
Score = 46.6 bits (109), Expect = 8e-04
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 19/196 (9%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWA---CGVTVVLPPPGTVGA----VDCRGGAPG 53
+N+ITDV G+ VGH + + L G GVT ++P G + C G
Sbjct: 20 LNAITDVEGVTVGHVTLISGEGKLIPGKGPVRTGVTAIVPHSGNIFKEKLIASCYVGNGF 79
Query: 54 TRETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAV 113
+ L+ ++L + G AADG++ ++ + + +G V V
Sbjct: 80 GKSIGLIQVKELGTLETPIILTNTLSVG-TAADGLIEYMLSFNEDIGITTGTV----NPV 134
Query: 114 IFDLPVGGWN----CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATL 169
+ + G N + +A +A + G+VG G G KGG+GTAS +
Sbjct: 135 VLECNDGYLNDIRGRHVKKEHVIAAIKSAKNEFETGSVGAGTGMICHGFKGGIGTASRRI 194
Query: 170 QSG---VTVGVLAVVN 182
+ G TVGVL + N
Sbjct: 195 EIGGKVYTVGVLLLTN 210
>gi|14590032|ref|NP_142096.1| D-aminopeptidase [Pyrococcus horikoshii]
gi|7520999|pir||D71227 probable D-aminopeptidase - Pyrococcus horikoshii
gi|3256464|dbj|BAA29147.1| 361aa long hypothetical D-aminopeptidase [Pyrococcus horikoshii]
Length = 361
Score = 45.1 bits (105), Expect = 0.002
Identities = 84/343 (24%), Positives = 136/343 (39%), Gaps = 40/343 (11%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWA---CGVTVVLPPPGTVGAVDCRGGA----PGT 54
N ITDV G++VGH + L G GVT +LP G + GA +
Sbjct: 19 NKITDVKGVKVGHVTLIKGKGKLIPGKGPVRTGVTAILPHEGNIYKEKVLAGAFVMNGYS 78
Query: 55 RETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVV-PIV---P 110
+ L+ ++L + G A +G++ ++ E + + +G V P+V
Sbjct: 79 KPVGLIQLWELGTIETPIILTNTLSIG-TAVEGLLDYILEENEDIGVTTGSVNPLVLECN 137
Query: 111 GAVIFDLPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ 170
+ + D + G + + + A A D G VG G G A KGG+G+AS ++
Sbjct: 138 DSYLND--IRGRHVK--REHVVEAIKRADEDFEEGAVGAGTGMSAFEFKGGIGSASRIVE 193
Query: 171 ---SGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAF 227
TVG L + N G+P VG +L + G
Sbjct: 194 IEGKKYTVGALVLSNFGRREDLTIAGVP-----VG---------------LELKNWPGRG 233
Query: 228 NTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVP 287
+ I +IA DA L+ R+A A GLART A+ GD A +T
Sbjct: 234 GEGKGSIIMIIATDAPLTGRQLNRVAKRAIVGLARTGGYAYNG-SGDIAVAFSTANRIKH 292
Query: 288 PEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
E V + +++ + A A+ + A++ +L A+ + G
Sbjct: 293 YEKEVIEIKALPDSVISPLFKATAEAVEEAIINSLLEARTMDG 335
>gi|38103362|gb|EAA50063.1| hypothetical protein MG03822.4 [Magnaporthe grisea 70-15]
Length = 395
Score = 45.1 bits (105), Expect = 0.002
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 233 TTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATG-AVAVPPEAG 291
+ I V+A DA L+P C+R+A A GLAR H L GD A +TG +V V E G
Sbjct: 270 SIIVVVATDAPLNPLQCQRLARRATAGLARVGGYGHN-LSGDIFLAFSTGSSVVVQTEGG 328
Query: 292 VP----AALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
P A S + + A+ AAAD A+ + A+ + G
Sbjct: 329 QPAQEIAGSSIDDNTINALFEAAADATQEAIYNALCMAETMTG 371
>gi|18978296|ref|NP_579653.1| d-aminopeptidase [Pyrococcus furiosus DSM 3638]
gi|18894120|gb|AAL82048.1| d-aminopeptidase [Pyrococcus furiosus DSM 3638]
Length = 361
Score = 44.3 bits (103), Expect = 0.004
Identities = 82/343 (23%), Positives = 138/343 (40%), Gaps = 40/343 (11%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWA---CGVTVVLPPPGTVGAVDCRGGA----PGT 54
NSI+DV G++VGH + L G GVT +LP G + GA +
Sbjct: 19 NSISDVKGVKVGHVTLIKGRGKLIPGKGPVRTGVTAILPHDGNIYKEKVLAGAFVMNGYS 78
Query: 55 RETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVV-PIV---P 110
+ L+ ++L + G A DG++ ++ + + +G V P+V
Sbjct: 79 KPVGLVQLWELGTIETPIILTNTLSIG-TAIDGLLDYVLRENEDIGVTTGSVNPLVLECN 137
Query: 111 GAVIFDLPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ 170
+ + D + G + + + A +A D G VG G G A KGG+G++S ++
Sbjct: 138 DSYLND--IRGRHVK--REHVVEAIESASKDFEEGAVGAGTGMSAFEFKGGIGSSSRIVE 193
Query: 171 ---SGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAF 227
TVG L + N G+P VG +L G
Sbjct: 194 VEGKKYTVGALVLSNFGKREDLTIAGVP-----VG---------------LELKDWPGRG 233
Query: 228 NTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVP 287
+ + I ++A DA L+ R+A A GLART A+ GD V A +T
Sbjct: 234 GSGKGSIIMIVATDAPLTARQLNRLAKRAVVGLARTGGYAYNG-SGDVVVAFSTANKIKH 292
Query: 288 PEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
E + + +++ + A A+ + A++ +L A+ + G
Sbjct: 293 YEKQEISIRALPDSVLSPIFKATAEAVEEAIINSLLQAKTMDG 335
>gi|26990549|ref|NP_745974.1| D-aminopeptidase putative [Pseudomonas putida KT2440]
gi|24985528|gb|AAN69438.1| D-aminopeptidase putative [Pseudomonas putida KT2440]
Length = 377
Score = 42.7 bits (99), Expect = 0.011
Identities = 93/356 (26%), Positives = 136/356 (38%), Gaps = 56/356 (15%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
+N+ITDV G+RVGH A+ G GVT++ P G+ C G
Sbjct: 24 LNAITDVPGVRVGHSNVRGRTAN-GRDILTGVTIIEPRVGSTSQQPCFAGVHVLNGNGDA 82
Query: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPV- 119
+R +A LL A+ + GV+R + +D P G + +++PV
Sbjct: 83 TGLEWIR--EAGLLTSPIAFTNTHSLGVVR-----DALIVLDREQQPD-DGRIYWNMPVV 134
Query: 120 -----------GGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTAS-- 166
G++ + + A G V G VG G G KGG+GTAS
Sbjct: 135 LETYDGLLNDINGFHVKHEHVAEALSNAVIG-PVIEGAVGGGSGMICHEFKGGIGTASRR 193
Query: 167 -ATLQSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLG 225
++ Q TVG + N G P VG + + Q SP
Sbjct: 194 LSSTQGSWTVGAIVQANHGIRNELRVDGYP-----VGRY------------MEQADSPFL 236
Query: 226 AFNTPFNTTIGVIAC---DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATG 282
+ P ++ C DA L P C R+A A GLART + GD A +TG
Sbjct: 237 KASLPHPGMGSIVVCLATDAPLLPHQCTRLAQRASIGLART-GGGNEDHSGDIFIAFSTG 295
Query: 283 AVAVPPEAGVPAALSPETQLVTAVG--------AAAADCLARAVLAGVLNAQPVAG 330
VPP A + +P T ++ V AA + + A++ +L A G
Sbjct: 296 N-HVPP-AAYESKRAPTTDNLSMVNNDHISELFLAATEAVEEAIINALLAADTAEG 349
>gi|23098305|ref|NP_691771.1| D-aminopeptidase [Oceanobacillus iheyensis HTE831]
gi|22776531|dbj|BAC12806.1| D-aminopeptidase [Oceanobacillus iheyensis HTE831]
Length = 328
Score = 37.4 bits (85), Expect = 0.41
Identities = 71/302 (23%), Positives = 112/302 (37%), Gaps = 65/302 (21%)
Query: 2 NSITDVGGIRVGH---YQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAP---GTR 55
+ ITDV G++VGH Y++++ ++ GVT +LP PG + G G
Sbjct: 9 DCITDVHGVQVGHTTLYEKINEKDTI----CTGVTAILPHPGNLFRQKVIAGCSVINGFG 64
Query: 56 ETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIF 115
+T L N + +++ ++ + G + ++ + +G +
Sbjct: 65 KTTGLVQLNELGLIESPIMLTNTLSIAPVMQGTLTYMLNRTEEIGDTTGTI--------- 115
Query: 116 DLPVGGWNCRPTADFGYSACAAAGVDVAV----------GTVGVGVGARAGALKGGVGTA 165
+L VG N A + A+ G VG G G + KGG+GTA
Sbjct: 116 NLIVGECNDSYLNSIRLQAITPSHAIKAIESASNESSEEGAVGAGTGMQCFGYKGGIGTA 175
Query: 166 SATLQSGVTVGVLA--VVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSP 223
S +Q + L VV+ GN AT W + G+
Sbjct: 176 SRLIQVEDVIYTLGGLVVSNYGN-RKQATFADW--EHTGQ-------------------- 212
Query: 224 LGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLD---GDTVFALA 280
TP + + ++A DA LS RIA GL RT + LD GD A +
Sbjct: 213 ----ETPDGSIMMILATDAPLSDRQLNRIAKRCAAGLGRT----GSALDHGSGDIAIAFS 264
Query: 281 TG 282
T
Sbjct: 265 TA 266
>gi|5821800|pdb|1B65|A Chain A, Structure Of L-Aminopeptidase D-Ala-EsteraseAMIDASE FROM
Ochrobactrum Anthropi, A Prototype For The Serine
Aminopeptidases, Reveals A New Variant Among The Ntn
Hydrolase Fold
gi|5821801|pdb|1B65|B Chain B, Structure Of L-Aminopeptidase D-Ala-EsteraseAMIDASE FROM
Ochrobactrum Anthropi, A Prototype For The Serine
Aminopeptidases, Reveals A New Variant Among The Ntn
Hydrolase Fold
gi|5821802|pdb|1B65|C Chain C, Structure Of L-Aminopeptidase D-Ala-EsteraseAMIDASE FROM
Ochrobactrum Anthropi, A Prototype For The Serine
Aminopeptidases, Reveals A New Variant Among The Ntn
Hydrolase Fold
gi|5821803|pdb|1B65|D Chain D, Structure Of L-Aminopeptidase D-Ala-EsteraseAMIDASE FROM
Ochrobactrum Anthropi, A Prototype For The Serine
Aminopeptidases, Reveals A New Variant Among The Ntn
Hydrolase Fold
gi|5821804|pdb|1B65|E Chain E, Structure Of L-Aminopeptidase D-Ala-EsteraseAMIDASE FROM
Ochrobactrum Anthropi, A Prototype For The Serine
Aminopeptidases, Reveals A New Variant Among The Ntn
Hydrolase Fold
gi|5821805|pdb|1B65|F Chain F, Structure Of L-Aminopeptidase D-Ala-EsteraseAMIDASE FROM
Ochrobactrum Anthropi, A Prototype For The Serine
Aminopeptidases, Reveals A New Variant Among The Ntn
Hydrolase Fold
gi|1310704|emb|CAA66259.1| D-aminopeptidase [Ochrobactrum anthropi]
Length = 375
Score = 37.0 bits (84), Expect = 0.48
Identities = 83/349 (23%), Positives = 127/349 (36%), Gaps = 37/349 (10%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWAC--GVTVVLPPPGTVGAVDCRGGAPGTRETDL 59
N+ITDV G+ VG ++ + G GVT +LP + V G
Sbjct: 27 NAITDVDGVGVGFQTIIENEPRPGRKRPARSGVTAILPHMQSETPVPVYAGVHRFNGNGE 86
Query: 60 LDPANSVR----FVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPG-AVI 114
+ + + F+ +++ G+A +RW+ + + I+P A
Sbjct: 87 MTGTHWIEDGGYFLGPVVITNTHGIGMAH-HATVRWMVDRYASTYQTDDFLWIMPVVAET 145
Query: 115 FDLPVGGWNCRPT--ADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSG 172
+D + N P AD + A V G G G G KGG GTAS ++ G
Sbjct: 146 YDGALNDINGFPVTEADVRKALDNVASGPVQEGNCGGGTGMITYGFKGGTGTASRVVEFG 205
Query: 173 ---VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNT 229
T+G L N G+P VG+ P Q+ +
Sbjct: 206 GRSFTIGALVQANHGQRDWLTIAGVP-----VGQHMRDGTPQSQLQERGSI--------- 251
Query: 230 PFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPE 289
I V+A D L P +R+A A G+ R P GD A +T A P +
Sbjct: 252 -----IVVLATDLPLMPHQLKRLARRASIGIGRNGTPGGNN-SGDIFIAFST-ANQRPMQ 304
Query: 290 AGVPAALSPET---QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYR 335
L E + + V AA D + AV+ ++ A+ + G P R
Sbjct: 305 HRSAPFLDVEMVNDEPLDTVYLAAVDSVEEAVVNAMIAAEDMGGTPFDR 353
>gi|17546102|ref|NP_519504.1| PROBABLE D-AMINOPEPTIDASE PROTEIN [Ralstonia solanacearum]
gi|17428398|emb|CAD15085.1| PROBABLE D-AMINOPEPTIDASE PROTEIN [Ralstonia solanacearum]
Length = 341
Score = 37.0 bits (84), Expect = 0.50
Identities = 67/206 (32%), Positives = 90/206 (43%), Gaps = 28/206 (13%)
Query: 132 YSACAAAGVDVAVGTVGVGVGARAGALKGGVGTAS--ATLQSGV--TVGVLAVVNAAGNV 187
Y+AC AAG A G VG G G A +KGG+G+AS L+ G TVG L + N
Sbjct: 144 YAACLAAGGAFAQGAVGAGRGMSAFGVKGGLGSASRVVALEDGTRRTVGALVLANFGVTA 203
Query: 188 VDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPA 247
G AD+ A AP E+ + I ++A DA L
Sbjct: 204 NLTLAGRRIGADIARVLAEDAPGPEK------------------GSIIMLLATDAPLDAR 245
Query: 248 ACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVP---AALSPETQLVT 304
RR+A+ A GLART GD A +T A VP P A++ ET L
Sbjct: 246 QLRRVALRAGAGLART-GSVFGHGSGDIALAFST-AYTVPHLGARPMPAVAMTHETHL-D 302
Query: 305 AVGAAAADCLARAVLAGVLNAQPVAG 330
+ AAAD + +A++ + A+ V G
Sbjct: 303 PLFQAAADSVEQAIVHALFYAETVTG 328
