BLASTP2 Result
of 
Bork Group's Advanced BLAST2 Search Service at 
EMBL.
back to BLAST2
BLASTP 2.0MP-WashU [09-Sep-1999] [irix6-r10k-b64 12:19:05 09-Sep-1999]
Copyright (C) 1996-1999 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-1999) http://blast.wustl.edu
Query= query_sequence
(194 letters)
Echofilter:
>Filtered+0
MQDLTSAAAYYHQSMMMTTAKQNXXXXXXXXXXKCPRCDSPNTKFCYYNNYNLSQPRHFC
KNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXXXXXXXXQTVAEKPDHHGSGSEEKEERV
SGQEMNPTRMLYGLPVGDPNGASFSSLLASNMQMGGLVYESGSRWLPGMDLGLGSVRRSD
DTWTDLAMNRMEKN
Database: nrdb Release 31.Jan.2000
454,538 sequences; 140,242,116 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Query sequence and locally-aligned HSPs from database sequences
0 40 80 120 160
| | | | | |194
query_sequence | __________________________________________________
^ v sptrembl|O82155|O8 | __________________________________________________
^ v sptrembl|O82156|O8 | __________________________________________________
^ v sptremblnew|AAD214 | ____________ _______
^ v sptrembl|Q43570|Q4 | ____________ _________
^ v sptrembl|Q9XGU5|Q9 | ____________________________________
^ v sptremblnew|AAF196 | _______________________
^ v sptrembl|Q9XGU6|Q9 | ____________
^ v sptremblnew|CAB375 | ____________
^ v sptremblnew|BAA785 | ____________
^ v sptrembl|Q9ZV33|Q9 | ____________
^ v sptrembl|Q9ZRX2|Q9 | ____________ _____________
^ v sptrembl|O82027|O8 | __________________________________
^ v sptrembl|Q41800|Q4 | __________________
^ v sptremblnew|BAA856 | ____________
^ v sptrembl|O80928|O8 | ____________
^ v sptrembl|Q39088|Q3 | ____________
^ v sptrembl|Q43575|Q4 | ____________
^ v sptrembl|Q41801|Q4 | ____________
^ v swiss|P38564|MNBA_ | ____________
^ v sptremblnew|CAB519 | ____________________________________
^ v sptrembl|O22984|O2 | _______________________
^ v sptremblnew|CAB516 | _______________________
^ v sptrembl|Q9XGU4|Q9 | ____________
^ v sptremblnew|AAD460 | ___________________________________
^ v sptremblnew|BAA785 | _______________________
^ v sptrembl|O24463|O2 | ____________
^ v sptremblnew|CAB434 | ____________
^ v sptremblnew|BAA785 | ____________
^ v sptrembl|O81600|O8 | ____________ ___________
^ v sptremblnew|CAB459 | _________________________
^ v sptrembl|Q43574|Q4 | ____________
^ v sptrembl|Q43573|Q4 | ____________
^ v sptrembl|Q43385|Q4 | ____________
^ v sptrembl|Q9ZPY0|Q9 | ____________
^ v sptremblnew|CAB401 | ____________
^ v sptrembl|Q9ZS77|Q9 | ____________
^ v sptremblnew|CAB458 | ____________
^ v sptremblnew|AAF246 | ____________
^ v sptrembl|O23083|O2 | ____________
^ v sptrembl|O81601|O8 | ____________
^ v sptrembl|O49550|O4 | ____________
^ v sptremblnew|BAA785 | ____________
^ v sptrembl|O22967|O2 | ____________
^ v sptrembl|Q39540|Q3 | ____________
^ v sptremblnew|BAA881 | ____________
^ v sptrembl|Q9ZSM2|Q9 | ___________
^ v sptremblnew|BAA785 | __________
^ v sptremblnew|CAB458 | ___________
^ v sptremblnew|CAB624 | _____
^ v sptremblnew|CAB493 | ________
Alignments:
^ = sptrembl|O82155|O82155 DOF ZINC FINGER PROTEIN.//:trembl|AB017564|AB017564_1
gene: "adof1"; product: "dof zinc finger protein"; Arabidopsis
thaliana adof1 mRNA for dof zinc finger protein, complete cds.
//:gp|AB017564|3608261 dof zinc finger protein [Arabidopsis
thaliana]
Length = 194
0 40 80 120 160
| | | | | |194
sptrembl|O82155|O8215 | __________________________________________________
Local hits (HSPs) | __________________________________________________
Score = 898 (321.2 bits), Expect = 6.3e-90, P = 6.3e-90
Identities = 168/194 (86%), Positives = 168/194 (86%)
Query: 1 MQDLTSAAAYYHQSMMMTTAKQNXXXXXXXXXXKCPRCDSPNTKFCYYNNYNLSQPRHFC 60
MQDLTSAAAYYHQSMMMTTAKQN KCPRCDSPNTKFCYYNNYNLSQPRHFC
Sbjct: 1 MQDLTSAAAYYHQSMMMTTAKQNQPELPEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFC 60
Query: 61 KNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXXXXXXXXQTVAEKPDHHGSGSEEKEERV 120
KNCRRYWTKGGALRNIPVGGGTR QTVAEKPDHHGSGSEEKEERV
Sbjct: 61 KNCRRYWTKGGALRNIPVGGGTRKSNKRSGSSPSSNLKNQTVAEKPDHHGSGSEEKEERV 120
Query: 121 SGQEMNPTRMLYGLPVGDPNGASFSSLLASNMQMGGLVYESGSRWLPGMDLGLGSVRRSD 180
SGQEMNPTRMLYGLPVGDPNGASFSSLLASNMQMGGLVYESGSRWLPGMDLGLGSVRRSD
Sbjct: 121 SGQEMNPTRMLYGLPVGDPNGASFSSLLASNMQMGGLVYESGSRWLPGMDLGLGSVRRSD 180
Query: 181 DTWTDLAMNRMEKN 194
DTWTDLAMNRMEKN
Sbjct: 181 DTWTDLAMNRMEKN 194
^ = sptrembl|O82156|O82156 DOF ZINC FINGER PROTEIN.//:trembl|AB017565|AB017565_1
gene: "adof2"; product: "Dof zinc finger protein"; Arabidopsis
thaliana adof2 mRNA for Dof zinc finger protein, complete cds.
//:gp|AB017565|3608263 Dof zinc finger protein [Arabidopsis
thaliana]
Length = 204
0 40 80 120 160 200
| | | | | |204
sptrembl|O82156|O8215 | __________________________________________________
Local hits (HSPs) | _________________________________________________
Score = 479 (173.7 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 103/208 (49%), Positives = 126/208 (60%)
Query: 1 MQDLTSAAAYYHQSMMMTTAKQNXXXXXXXXXXKCPRCDSPNTKFCYYNNYNLSQPRHFC 60
MQD AAYY Q+MM +Q KCPRCDSPNTKFCYYNNYNLSQPRHFC
Sbjct: 1 MQD---PAAYY-QTMMAKQQQQQQPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFC 56
Query: 61 KNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXXXXXXXXQTVAEKPDHHGSGSEEKEERV 120
K+CRRYWTKGGALRN+PVGGG+R + + + + + + R
Sbjct: 57 KSCRRYWTKGGALRNVPVGGGSRKNATKRSTSSSSSASSPSNSSQNKKTKNPDPDPDPRN 116
Query: 121 SGQ-EMNPTRMLYGLPVGDPN------GASFSSLLASNMQMG---GLVYESGSRW-LPGM 169
S + +++PTRMLYG P+GD + G SFSSLLA+NMQ+G G + GS W PGM
Sbjct: 117 SQKPDLDPTRMLYGFPIGDQDVKGMEIGGSFSSLLANNMQLGLGGGGIMLDGSGWDHPGM 176
Query: 170 DLGLGSVR---RSDDTWTDLAMNRMEKN 194
LGL +++ WTDLAMNR EKN
Sbjct: 177 GLGLRRTEPGNNNNNPWTDLAMNRAEKN 204
^ = sptremblnew|AAD21486|AAD21486 PUTATIVE DOF ZINC FINGER
PROTEIN.//:tremblnew|AC006587|AC006587_6 gene: "At2g28510";
product: "putative DOF zinc finger protein"; Arabidopsis thaliana
chromosome II section 161 of 255 of the complete sequence.
//:trembl|AC006587|AC006587_7 gene: "T17D12.7"; product: "putative
zinc finger protein"; Arabidopsis thaliana chromosome II BAC
T17D12 genomic sequence, complete sequence. //:gp|AC006587|4510399
putative zinc finger protein [Arabidopsis
thaliana]//:gpnew|AC006587|4510399 putative DOF zinc finger protein
[Arabidopsis thaliana]
Length = 259
0 60 120 180 240
| | | | | |259
sptremblnew|AAD21486| | __________________________________________________
Local hits (HSPs) | _________ ______
Score = 266 (98.7 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 42/49 (85%), Positives = 47/49 (95%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+SPNTKFCYYNNY+LSQPR+FCK+CRRYWTKGG LRN+PVGGG R
Sbjct: 21 CPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCR 69
Score = 48 (22.0 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 112 GSEEKEERVSGQEMN---PTRMLYGLP---VGDPNG 141
G+E K+E V+ N P+++ +G P GD G
Sbjct: 195 GNERKQENVNNNNNNSENPSKVFWGFPWQMTGDSAG 230
^ = sptrembl|Q43570|Q43570 ZN FINGER PROTEIN
(FRAGMENT).//:trembl|X97942|NTBBF11_1 gene: "NtBBF1.1"; product:
"Zn finger protein"; N.tabacum mRNA for zinc finger protein,
BBF1.1 //:pironly|T02370|T02370 finger protein BBF1.1 - common
tobacco (fragment)//:gp|X97942|1360078 Zn finger protein [Nicotiana
tabacum]
Length = 234
0 50 100 150 200
| | | | | |234
sptrembl|Q43570|Q4357 | __________________________________________________
Local hits (HSPs) | __________ ________
Score = 253 (94.1 bits), Expect = 2.6e-25, Sum P(2) = 2.6e-25
Identities = 40/49 (81%), Positives = 46/49 (93%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNY+LSQPR+FCK CRRYWT GG+LRN+PVGGG+R
Sbjct: 46 CPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTDGGSLRNVPVGGGSR 94
Score = 50 (22.7 bits), Expect = 2.6e-25, Sum P(2) = 2.6e-25
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 134 LPVGDPNGA-SF-SSLLASNMQMGGLVYESGSRWLPGM-DL 171
LP+ +PN SF SS++ ++Y S S LP + DL
Sbjct: 161 LPLMNPNSTTSFMSSIMPQISDSNNIMYSSSSTGLPNLHDL 201
^ = sptrembl|Q9XGU5|Q9XGU5 ZINC FINGER PROTEIN
DOF3.//:tremblnew|AF155817|AF155817_1 product: "zinc finger protein
OBP4"; Arabidopsis thaliana zinc finger protein OBP4 mRNA,
complete cds. //:trembl|AF155817|AF155817_1 product: "zinc finger
protein Dof3"; Arabidopsis thaliana zinc finger protein Dof3 mRNA,
complete cds. //:gp|AF155817|5059396 zinc finger protein Dof3
[Arabidopsis thaliana]//:gpnew|AF155817|5059396 zinc finger protein
OBP4 [Arabidopsis thaliana]
Length = 336
0 70 140 210 280
| | | | | |336
sptrembl|Q9XGU5|Q9XGU | __________________________________________________
Local hits (HSPs) | _____________________
Score = 284 (105.0 bits), Expect = 7.3e-25, P = 7.3e-25
Identities = 60/145 (41%), Positives = 73/145 (50%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXX 93
KCPRC+S NTKFCYYNNYNLSQPRHFCKNCRRYWTKGG LRN+PVGG +R
Sbjct: 51 KCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGRSRKAKRSKTKQV 110
Query: 94 -XXXXXXQTVAEKPDHHGSGSEEKEERVSGQEM-NPTRMLYGLPVGDPNGASFSSLLASN 151
+ + DHH S + + +P L P +S +
Sbjct: 111 PSSSSADKPTTTQDDHHVEEKSSTGSHSSSETLLSPLLTLPPSPPSPSPRRQVASSVIPG 170
Query: 152 MQMGGL-VYESGSRWLPGMDLGLGS 175
M + +Y +G W LG GS
Sbjct: 171 FDMPNMKIYGNGIEW--STLLGQGS 193
^ = sptremblnew|AAF19678|AAF19678 F1N19.19.//:tremblnew|AC009519|AC009519_19
product: "F1N19.19"; Genomic sequence for Arabidopsis thaliana BAC
F1N19 from chromosome I, complete sequence.
//:gpnew|AC009519|6633819 F1N19.19 [Arabidopsis thaliana]
Length = 385
0 80 160 240 320
| | | | | |385
sptremblnew|AAF19678| | __________________________________________________
Local hits (HSPs) | _________ __
Score = 255 (94.8 bits), Expect = 5.1e-24, Sum P(2) = 5.1e-24
Identities = 42/72 (58%), Positives = 51/72 (70%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXXX 94
CPRC+S NTKFCYYNNY+L+QPR+FCK+CRRYWT GG+LRNIPVGGG R
Sbjct: 37 CPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSNSSS 96
Query: 95 XXXXXQTVAEKP 106
+ ++KP
Sbjct: 97 SSPSSSSSSKKP 108
Score = 37 (18.1 bits), Expect = 5.1e-24, Sum P(2) = 5.1e-24
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 104 EKPDHHGSGSEEKEERVSGQEM 125
E D H EKEE + Q +
Sbjct: 296 ENNDEHSDHEHEKEEGEADQSV 317
^ = sptrembl|Q9XGU6|Q9XGU6 ZINC FINGER PROTEIN
DOF2.//:tremblnew|AF155816|AF155816_1 product: "zinc finger protein
OBP2"; Arabidopsis thaliana zinc finger protein OBP2 mRNA,
complete cds. //:trembl|AF155816|AF155816_1 product: "zinc finger
protein Dof2"; Arabidopsis thaliana zinc finger protein Dof2 mRNA,
complete cds. //:gp|AF155816|5059394 zinc finger protein Dof2
[Arabidopsis thaliana]//:gpnew|AF155816|5059394 zinc finger protein
OBP2 [Arabidopsis thaliana]
Length = 227
0 50 100 150 200
| | | | | |227
sptrembl|Q9XGU6|Q9XGU | __________________________________________________
Local hits (HSPs) | __________
Score = 274 (101.5 bits), Expect = 8.4e-24, P = 8.4e-24
Identities = 44/50 (88%), Positives = 47/50 (94%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRCDS NTKFCYYNNYNL+QPRHFCK CRRYWT+GGALRN+PVGGG R
Sbjct: 18 KCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCR 67
^ = sptremblnew|CAB37540|CAB37540 HYPOTHETICAL 27.3 KD
PROTEIN.//:trembl|AL035538|ATF20D10_12 gene: "F20D10.120"; product:
"putative protein"; Arabidopsis thaliana DNA chromosome 4, BAC
clone F20D10 (ESSA project) //:pironly|T05627|T05627 hypothetical
protein F20D10.120 - Arabidopsis thaliana//:gp|AL035538|4467106
putative protein [Arabidopsis thaliana]
Length = 245
0 50 100 150 200
| | | | | |245
sptremblnew|CAB37540| | __________________________________________________
Local hits (HSPs) | __________
Score = 274 (101.5 bits), Expect = 8.4e-24, P = 8.4e-24
Identities = 43/50 (86%), Positives = 48/50 (96%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRCDS NTKFCYYNNY+LSQPRH+CKNCRRYWT+GGALRN+P+GG TR
Sbjct: 41 KCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGGSTR 90
^ = sptremblnew|BAA78575|BAA78575 DOF ZINC FINGER
PROTEIN.//:trembl|AB028132|AB028132_1 product: "Dof zinc finger
protein"; Oryza sativa mRNA for Dof zinc finger protein, complete
cds. //:gp|AB028132|4996646 Dof zinc finger protein [Oryza sativa]
Length = 282
0 60 120 180 240
| | | | | |282
sptremblnew|BAA78575| | __________________________________________________
Local hits (HSPs) | ________
Score = 274 (101.5 bits), Expect = 8.4e-24, P = 8.4e-24
Identities = 44/50 (88%), Positives = 47/50 (94%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRC+S NTKFCYYNNYNLSQPRHFCK+CRRYWTKGG LRN+PVGGG R
Sbjct: 46 KCPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCR 95
^ = sptrembl|Q9ZV33|Q9ZV33 PUTATIVE ZINC FINGER
PROTEIN.//:tremblnew|AC005727|AC005727_6 gene: "At2g28810";
product: "putative DOF zinc finger protein"; Arabidopsis thaliana
chromosome II section 164 of 255 of the complete sequence.
//:trembl|AC005727|AC005727_7 gene: "F8N16.10"; product: "putative
zinc finger protein"; Arabidopsis thaliana chromosome II BAC F8N16
genomic sequence, complete sequence. //:gp|AC005727|3927829
putative zinc finger protein [Arabidopsis
thaliana]//:gpnew|AC005727|3927829 putative DOF zinc finger protein
[Arabidopsis thaliana]
Length = 320
0 70 140 210 280
| | | | | |320
sptrembl|Q9ZV33|Q9ZV3 | __________________________________________________
Local hits (HSPs) | _______
Score = 269 (99.8 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 43/50 (86%), Positives = 47/50 (94%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRCDS NTKFCY+NNYNL+QPRHFCK CRRYWT+GGALRN+PVGGG R
Sbjct: 95 KCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCR 144
^ = sptrembl|Q9ZRX2|Q9ZRX2 PBF PROTEIN (FRAGMENT).//:trembl|AJ012284|TAE012284_1
gene: "pbf"; product: "PBF protein"; Triticum aestivum mRNA for
DNA binding protein PBF, partial //:gp|AJ012284|3790264 PBF protein
[Triticum aestivum]
Length = 330
0 70 140 210 280
| | | | | |330
sptrembl|Q9ZRX2|Q9ZRX | __________________________________________________
Local hits (HSPs) | _______ ________
Score = 244 (91.0 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 38/50 (76%), Positives = 45/50 (90%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
+CPRC S NTKFCYYNNY++SQPR+FCK CRRYWT GG+LRN+P+GGG R
Sbjct: 37 ECPRCKSGNTKFCYYNNYSMSQPRYFCKACRRYWTHGGSLRNVPIGGGCR 86
Score = 39 (18.8 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 18/60 (30%), Positives = 26/60 (43%)
Query: 121 SGQEMNPTRMLYGLPV-----GD--PNGASFSSLLASNMQMGGLVYESGSRWLPGMDLGL 173
+G M P + +G+PV GD G + AS Q G E G + G+ +GL
Sbjct: 197 NGMLMTPPAVSFGIPVPMQQHGDLVVGGNGIGAATASIFQ--GATSEEGDDGMGGV-MGL 253
^ = sptrembl|O82027|O82027 DOF ZINC FINGER PROTEIN
(FRAGMENT).//:trembl|AJ009594|NTA9594_1 gene: "BBF1"; product: "Dof
zinc finger protein"; Nicotiana tabacum BBF1 gene
//:pironly|T02203|T02203 finger protein Dof - common tobacco
(fragment)//:gp|AJ009594|3341468 Dof zinc finger protein [Nicotiana
tabacum]
Length = 262
0 60 120 180 240
| | | | | |262
sptrembl|O82027|O8202 | __________________________________________________
Local hits (HSPs) | ____________________________
Score = 268 (99.4 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 59/151 (39%), Positives = 80/151 (52%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXXX 94
CPRC+S NTKFCYYNNY+LSQPR+FCK CRRYWT+GG+LRN+PVGGG+R
Sbjct: 38 CPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSSSNN 97
Query: 95 XXXXXQTVAEK-PDHHGSGSEEKEERVSGQE-----MNPTRM--------LYGLPVGDPN 140
+ +K PD S + + ++ NP+ LP+ +PN
Sbjct: 98 SSSSTSSSYKKIPDLTIPTSSQNPKIINEPHDLNLAFNPSATSNFSNISEFMALPLMNPN 157
Query: 141 GA-SF-SSLLASNMQMGGLVYESGSRWLPGM 169
SF SS++ ++Y S S LP +
Sbjct: 158 STTSFMSSIMPQLSDSNNIMYSSSSTGLPNL 188
^ = sptrembl|Q41800|Q41800 DOF2 (FRAGMENT).//:trembl|X79934|ZMDOF2_1 product:
"Dof2"; Z.mays Dof2 mRNA //:pironly|S59852|S59852 DNA-binding
protein Dof2 - maize (fragment)//:gp|X79934|1061306 Dof2 [Zea mays]
Length = 225
0 50 100 150 200
| | | | | |225
sptrembl|Q41800|Q4180 | __________________________________________________
Local hits (HSPs) | _______________
Score = 266 (98.7 bits), Expect = 5.9e-23, P = 5.9e-23
Identities = 43/72 (59%), Positives = 48/72 (66%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXXX 94
CPRC S +TKFCYYNNYN SQPRH CK+CRRYWTKGG+LRN+PVGGGTR
Sbjct: 20 CPRCGSRDTKFCYYNNYNTSQPRHLCKSCRRYWTKGGSLRNVPVGGGTRKSSSSSSSSSA 79
Query: 95 XXXXXQTVAEKP 106
T + P
Sbjct: 80 ATTTTTTTSTSP 91
^ = sptremblnew|BAA85655|BAA85655 ELICITOR-RESPONSIVE DOF PROTEIN
ERDP.//:trembl|AB026297|AB026297_1 product: "elicitor-responsive
Dof protein ERDP"; Pisum sativum mRNA for elicitor-responsive Dof
protein ERDP, complete cds. //:gp|AB026297|6092016
elicitor-responsive Dof protein ERDP [Pisum sativum]
Length = 283
0 60 120 180 240
| | | | | |283
sptremblnew|BAA85655| | __________________________________________________
Local hits (HSPs) | ________
Score = 264 (98.0 bits), Expect = 9.6e-23, P = 9.6e-23
Identities = 42/50 (84%), Positives = 47/50 (94%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRCDS NTKFCYYNNY+L+QPR+FCK+CRRYWTKGG LRN+PVGGG R
Sbjct: 38 KCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCR 87
^ = sptrembl|O80928|O80928 PUTATIVE ZINC FINGER
PROTEIN.//:tremblnew|AC004684|AC004684_9 gene: "At2g37590";
product: "putative DOF zinc finger protein"; Arabidopsis thaliana
chromosome II section 204 of 255 of the complete sequence.
//:trembl|AC004684|AC004684_9 gene: "F13M22.9"; product: "putative
zinc finger protein"; Arabidopsis thaliana chromosome II BAC
F13M22 genomic sequence, complete sequence.
//:pironly|T02525|T02525 hypothetical protein F13M22.9 -
Arabidopsis thaliana//:gp|AC004684|3236241 putative zinc finger
protein [Arabidopsis thaliana]//:gpnew|AC004684|3236241 putative
DOF zinc finger protein [Arabidopsis thaliana]
Length = 330
0 70 140 210 280
| | | | | |330
sptrembl|O80928|O8092 | __________________________________________________
Local hits (HSPs) | _______
Score = 262 (97.3 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 41/50 (82%), Positives = 47/50 (94%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRC+S NTKFCY+NNY+L+QPRHFCK CRRYWT+GGALRN+PVGGG R
Sbjct: 90 KCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCR 139
^ = sptrembl|Q39088|Q39088 DNA BINDING PROTEIN.//:trembl|X89192|ATDNABPRO_1
product: "DNA binding protein"; A.thaliana mRNA for DNA binding
protein //:gp|X89192|1212759 DNA binding protein [Arabidopsis
thaliana]
Length = 240
0 50 100 150 200
| | | | | |240
sptrembl|Q39088|Q3908 | __________________________________________________
Local hits (HSPs) | __________
Score = 261 (96.9 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 42/49 (85%), Positives = 44/49 (89%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRCDS NTKFCYYNNYN SQPRHFCK CRRYWT GG LR++PVGGGTR
Sbjct: 19 CPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTR 67
^ = sptrembl|Q43575|Q43575 ZN FINGER PROTEIN
(FRAGMENT).//:trembl|X97947|NTBBF3_1 gene: "NtBBF3"; product: "Zn
finger protein"; N.tabacum mRNA for zinc finger protein, BBF3
//:pironly|T02375|T02375 finger protein BBF3 - common tobacco
(fragment)//:gp|X97947|1360088 Zn finger protein [Nicotiana
tabacum]
Length = 119
0 30 60 90
| | | | |119
sptrembl|Q43575|Q4357 | __________________________________________________
Local hits (HSPs) | ____________________
Score = 260 (96.6 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 42/50 (84%), Positives = 47/50 (94%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRCDS +TKFCYYNNY+L+QPR+FCK+CRRYWTKGG LRNIPVGGG R
Sbjct: 46 KCPRCDSTHTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCR 95
^ = sptrembl|Q41801|Q41801 DOF3 GENE (FRAGMENT).//:trembl|X79935|ZMDOF3_1
product: "Dof3 gene"; Z.mays Dof3 mRNA //:pironly|S59853|S59853
DNA-binding protein Dof3 - maize (fragment)//:gp|X79935|1061308
Dof3 gene [Zea mays]
Length = 302
0 60 120 180 240 300
| | | | | |302
sptrembl|Q41801|Q4180 | __________________________________________________
Local hits (HSPs) | ________
Score = 260 (96.6 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 41/50 (82%), Positives = 47/50 (94%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRCDS NTKFCY+NNY+L+QPRHFC+ CRRYWT+GGALRN+PVGGG R
Sbjct: 33 KCPRCDSTNTKFCYFNNYSLTQPRHFCRACRRYWTRGGALRNVPVGGGYR 82
^ = swiss|P38564|MNBA_MAIZE DNA-BINDING PROTEIN MNB1A.//:trembl|X66076|ZMMNB1A_1
gene: "MNB1a"; product: "DNA-binding protein"; Z.mays MNB1a mRNA
for DNA-binding protein //:gp|X66076|517258 DNA-binding protein
[Zea mays]
Length = 238
0 50 100 150 200
| | | | | |238
swiss|P38564|MNBA_MAI | __________________________________________________
Local hits (HSPs) | __________
Score = 259 (96.2 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 42/49 (85%), Positives = 44/49 (89%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC S +TKFCYYNNYN SQPRHFCK CRRYWTKGG LRN+PVGGGTR
Sbjct: 49 CPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTR 97
^ = sptremblnew|CAB51901|CAB51901 DOF ZINC FINGER
PROTEIN.//:trembl|AJ243033|ATH243033_1 gene: "dof6"; product: "dof
zinc finger protein"; Arabidopsis thaliana mRNA for dof zinc
finger protein (dof6 gene) //:gp|AJ243033|5689615 dof zinc finger
protein [Arabidopsis thaliana]
Length = 245
0 50 100 150 200
| | | | | |245
sptremblnew|CAB51901| | __________________________________________________
Local hits (HSPs) | _____________________________
Score = 259 (96.2 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 59/148 (39%), Positives = 76/148 (51%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXX 93
+CPRCDS NTKFCYYNNY+LSQPR+FCK+CRRYWTKGG LRNIP+GG R
Sbjct: 41 RCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKHKRSSSATK 100
Query: 94 XXXXXXQ-TVAEKPDHHGSGS-EEKEERVSGQEMNPTRMLYGL----PVGDPNGASFSSL 147
+ T+ + S +S ++M + Y L P+G + F S
Sbjct: 101 SLRTTPEPTMTHDGKSFPTASFGYNNNNISNEQME-LGLAYALLNKQPLGVSSHLGFGSS 159
Query: 148 LASNMQMGGLVYESGSRWLPGMDLGLGS 175
S M M G VY + S + G+
Sbjct: 160 -QSPMAMDG-VYGTTSHQMENTGYAFGN 185
^ = sptrembl|O22984|O22984 ZINC FINGER PROTEIN
ISOLOG.//:trembl|AC002343|ATAC2343_13 gene: "T19F6.13"; product:
"zinc finger protein isolog"; Arabidopsis thaliana chromosome IV
BAC T19F6 genomic sequence, complete sequence.
//:gp|AC002343|2262110 zinc finger protein isolog [Arabidopsis
thaliana]
Length = 342
0 70 140 210 280
| | | | | |342
sptrembl|O22984|O2298 | __________________________________________________
Local hits (HSPs) | ______________
Score = 258 (95.9 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 49/99 (49%), Positives = 61/99 (61%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR----XXXXXXX 90
CPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRNIPVGGG+R
Sbjct: 55 CPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKRSHSSSSD 114
Query: 91 XXXXXXXXXQTVAEK--PDHHGSGSEEKEERVSGQEMNP 127
Q +K DHH ++ ++GQ NP
Sbjct: 115 ISNNHSDSTQPATKKHLSDHHHHLMSMSQQGLTGQ--NP 151
^ = sptremblnew|CAB51649|CAB51649 HYPOTHETICAL 39.6 KD
PROTEIN.//:trembl|AL109619|ATT19F6_5 gene: "T19F6.50"; product:
"putative protein"; Arabidopsis thaliana DNA chromosome 4, BAC
clone T19F6, partial sequence (ESSA project)
//:pironly|T13450|T13450 hypothetical protein T19F6.50 -
Arabidopsis thaliana//:gp|AL109619|5668634 putative protein
[Arabidopsis thaliana]
Length = 361
0 80 160 240 320
| | | | | |361
sptremblnew|CAB51649| | __________________________________________________
Local hits (HSPs) | _____________
Score = 258 (95.9 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 49/99 (49%), Positives = 61/99 (61%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR----XXXXXXX 90
CPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRNIPVGGG+R
Sbjct: 74 CPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKRSHSSSSD 133
Query: 91 XXXXXXXXXQTVAEK--PDHHGSGSEEKEERVSGQEMNP 127
Q +K DHH ++ ++GQ NP
Sbjct: 134 ISNNHSDSTQPATKKHLSDHHHHLMSMSQQGLTGQ--NP 170
^ = sptrembl|Q9XGU4|Q9XGU4 ZINC FINGER PROTEIN
DOF4.//:tremblnew|AF155818|AF155818_1 product: "zinc finger protein
OBP3"; Arabidopsis thaliana zinc finger protein OBP3 mRNA,
complete cds. //:trembl|AF155818|AF155818_1 product: "zinc finger
protein Dof4"; Arabidopsis thaliana zinc finger protein Dof4 mRNA,
complete cds. //:gp|AF155818|5059398 zinc finger protein Dof4
[Arabidopsis thaliana]//:gpnew|AF155818|5059398 zinc finger protein
OBP3 [Arabidopsis thaliana]
Length = 264
0 60 120 180 240
| | | | | |264
sptrembl|Q9XGU4|Q9XGU | __________________________________________________
Local hits (HSPs) | _________
Score = 257 (95.5 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 40/49 (81%), Positives = 46/49 (93%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRCDS NTKFCY+NNY+L+QPRHFCK CRRYWT+GG+LRN+PVGGG R
Sbjct: 19 CPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFR 67
^ = sptremblnew|AAD46020|AAD46020 F16N3.5 PROTEIN.//:trembl|AC007519|AC007519_5
gene: "F16N3.5"; Sequence of BAC F16N3 from Arabidopsis thaliana
chromosome 1, complete sequence. //:gp|AC007519|5668794 Similar to
gb|U82230 prolamin box binding factor (PBF) from Zea mays.
[Arabidopsis thaliana]
Length = 209
0 50 100 150 200
| | | | | |209
sptremblnew|AAD46020| | __________________________________________________
Local hits (HSPs) | _______________________________
Score = 256 (95.2 bits), Expect = 6.8e-22, P = 6.8e-22
Identities = 61/142 (42%), Positives = 78/142 (54%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXXX 94
CPRC+S TKFCYYNNYNL+QPR++CK+CRRYWT+GG LR++PVGGGTR
Sbjct: 31 CPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRDVPVGGGTRRSSSKRHRSFS 90
Query: 95 XXXXXQTVAEKPDHHGSGSEEKEERVSGQEMNPTRMLYGLPVGDPNGASFSSLLASNMQM 154
T A S + + E + T++ L G +G SF+SLL
Sbjct: 91 ------TTATSSSSSSSVITTTTQEPATTEASQTKVT-NLISG--HG-SFASLLGLGSGN 140
Query: 155 GGLVYESGSRW-LPGMDLG-LG 174
GGL Y G + L M +G LG
Sbjct: 141 GGLDYGFGYGYGLEEMSIGYLG 162
^ = sptremblnew|BAA78572|BAA78572 DOF ZINC FINGER
PROTEIN.//:trembl|AB028129|AB028129_1 product: "Dof zinc finger
protein"; Oryza sativa mRNA for Dof zinc finger protein, complete
cds. //:gp|AB028129|4996640 Dof zinc finger protein [Oryza sativa]
Length = 378
0 80 160 240 320
| | | | | |378
sptremblnew|BAA78572| | __________________________________________________
Local hits (HSPs) | ____________
Score = 255 (94.8 bits), Expect = 8.6e-22, P = 8.6e-22
Identities = 45/93 (48%), Positives = 53/93 (56%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXXX 94
CPRC+S NTKFCYYNNY+L QPR+FCK CRRYWT+GG+LRN+PVGGG+R
Sbjct: 80 CPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSSAAS 139
Query: 95 XXXXXQTVAEKPDHHGSGSEEKEERVSGQEMNP 127
+ A S S G NP
Sbjct: 140 ASPASASTANSVVTSASMSMSMASTGGGASKNP 172
^ = sptrembl|O24463|O24463 PROLAMIN BOX BINDING FACTOR.//:trembl|U82230|U82230_1
gene: "PBF"; product: "prolamin box binding factor"; Zea mays
endosperm-specific prolamin box binding factor (PBF) mRNA, complete
cds. //:pironly|T02046|T02046 prolamin box binding factor -
maize//:gp|U82230|2393775 prolamin box binding factor [Zea mays]
Length = 328
0 70 140 210 280
| | | | | |328
sptrembl|O24463|O2446 | __________________________________________________
Local hits (HSPs) | _______
Score = 254 (94.5 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 40/50 (80%), Positives = 45/50 (90%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRCDS NTKFCYYNNY++SQPR+FCK CRRYWT GG LRN+P+GGG R
Sbjct: 61 KCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGCR 110
^ = sptremblnew|CAB43436|CAB43436 HYPOTHETICAL 26.9 KD
PROTEIN.//:trembl|AL050300|ATF22O6_18 gene: "F22O6.180"; product:
"putative protein"; Arabidopsis thaliana DNA chromosome 3, BAC
clone F22O6 //:pironly|T08455|T08455 hypothetical protein F22O6.180
- Arabidopsis thaliana//:gp|AL050300|4886283 putative protein
[Arabidopsis thaliana]
Length = 247
0 50 100 150 200
| | | | | |247
sptremblnew|CAB43436| | __________________________________________________
Local hits (HSPs) | _________
Score = 252 (93.8 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 40/49 (81%), Positives = 45/49 (91%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC S NTKFCYYNNY+L+QPR+FCK CRRYWTKGG+LRN+PVGGG R
Sbjct: 27 CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCR 75
^ = sptremblnew|BAA78573|BAA78573 DOF ZINC FINGER
PROTEIN.//:trembl|AB028130|AB028130_1 product: "Dof zinc finger
protein"; Oryza sativa mRNA for Dof zinc finger protein, complete
cds. //:gp|AB028130|4996642 Dof zinc finger protein [Oryza sativa]
Length = 375
0 80 160 240 320
| | | | | |375
sptremblnew|BAA78573| | __________________________________________________
Local hits (HSPs) | ______
Score = 251 (93.4 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 39/49 (79%), Positives = 46/49 (93%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNY+L QPR+FCK CRRYWT+GG+LRN+PVGGG+R
Sbjct: 76 CPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSR 124
^ = sptrembl|O81600|O81600 H-PROTEIN PROMOTER BINDING
FACTOR-2A.//:sptremblnew|CAB61976|CAB61976 H-PROTEIN PROMOTER
BINDING FACTOR-2A.//:trembl|AF079503|AF079503_1 product: "H-protein
promoter binding factor-2a"; Arabidopsis thaliana H-protein
promoter binding factor-2a mRNA, complete cds.
//:trembl|AL132955|ATF1P2_5 gene: "F1P2.50"; product: "H-protein
promoter binding factor-2a"; Arabidopsis thaliana DNA chromosome
3, BAC clone F1P2 //:gp|AL132955|6522533 H-protein promoter binding
factor-2a [Arabidopsis thaliana]//:gp|AF079503|3386546 H-protein
promoter binding factor-2a [Arabidopsis thaliana]
Length = 448
0 90 180 270 360
| | | | | |448
sptrembl|O81600|O8160 | __________________________________________________
Local hits (HSPs) | _____ _____
Score = 233 (87.1 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 36/49 (73%), Positives = 41/49 (83%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC S TKFCYYNNYN++QPRHFCK C+RYWT GG +RN+PVG G R
Sbjct: 112 CPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRR 160
Score = 43 (20.2 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 101 TVAEKPDHHGSGSEEKE-ERVSGQEMNPTRMLYGLPVGDPNGASFSSL 147
T+ + P GS ++ E ER Q+ + L + DPN A+ SS+
Sbjct: 347 TLGKHPRDEGSSKKDNETERK--QKAGCVLVPKTLRIDDPNEAAKSSI 392
^ = sptremblnew|CAB45900|CAB45900 PROLAMIN BOX BINDING
PROTEIN-LIKE.//:trembl|AL080282|ATT13K14_21 gene: "T13K14.210";
product: "prolamin box binding protein-like"; Arabidopsis thaliana
DNA chromosome 4, BAC clone T13K14 (ESSA project)
//:pironly|T10647|T10647 hypothetical protein T13K14.210 -
Arabidopsis thaliana//:gp|AL080282|5262795 prolamin box binding
protein-like [Arabidopsis thaliana]
Length = 210
0 50 100 150 200
| | | | | |210
sptremblnew|CAB45900| | __________________________________________________
Local hits (HSPs) | ________________________
Score = 250 (93.1 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 49/103 (47%), Positives = 62/103 (60%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXXX 94
CPRCDS NTKFC+YNNY+ SQPR+FCKNCRRYWT GGALRNIPVGG R
Sbjct: 26 CPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGGSCRKPKRLKVDQSS 85
Query: 95 XXXXXQTVAEKPDHHGS--GSEEKEERVSGQEMNPTRMLYGLP 135
+V +P +H S ++E E V + + + + +P
Sbjct: 86 ISEMV-SVENQPINHQSFRQTQENNEFVRSFDASSSATVTAVP 127
^ = sptrembl|Q43574|Q43574 ZN FINGER PROTEIN
(FRAGMENT).//:trembl|X97946|NTBBF2B_1 gene: "NtBBF2b"; product: "Zn
finger protein"; N.tabacum mRNA for zinc finger protein, BBF2b
//:pironly|T02374|T02374 finger protein BBF2b - common tobacco
(fragment)//:gp|X97946|1360086 Zn finger protein [Nicotiana
tabacum]
Length = 114
0 30 60 90
| | | | |114
sptrembl|Q43574|Q4357 | __________________________________________________
Local hits (HSPs) | _____________________
Score = 248 (92.4 bits), Expect = 4.8e-21, P = 4.8e-21
Identities = 39/49 (79%), Positives = 47/49 (95%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNY+LSQPR+FCK C+RYWT+GG+LR+IPVGGG+R
Sbjct: 53 CPRCNSTNTKFCYYNNYSLSQPRYFCKTCKRYWTEGGSLRSIPVGGGSR 101
^ = sptrembl|Q43573|Q43573 ZN FINGER PROTEIN
(FRAGMENT).//:trembl|X97945|NTBBF2A_1 gene: "NtBBF2a"; product: "Zn
finger protein"; N.tabacum mRNA for zinc finger protein, BBF2aO
//:pironly|T02373|T02373 finger protein BBF2a - common tobacco
(fragment)//:gp|X97945|1360084 Zn finger protein [Nicotiana
tabacum]
Length = 238
0 50 100 150 200
| | | | | |238
sptrembl|Q43573|Q4357 | __________________________________________________
Local hits (HSPs) | __________
Score = 247 (92.0 bits), Expect = 6.1e-21, P = 6.1e-21
Identities = 38/49 (77%), Positives = 47/49 (95%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNY+LSQPR+FCK C+RYWT+GG+LR+IP+GGG+R
Sbjct: 42 CPRCNSTNTKFCYYNNYSLSQPRYFCKTCKRYWTEGGSLRSIPIGGGSR 90
^ = sptrembl|Q43385|Q43385 ZN FINGER PROTEIN.//:trembl|X97941|ATBBFA_1 gene:
"DAG1"; product: "Zn finger protein"; A.thaliana mRNA for zinc
finger protein DAG1 (BBFa) //:pironly|S71366|S71366 finger protein
rolB - Arabidopsis thaliana//:gp|X97941|1359493 Zn finger protein
[Arabidopsis thaliana]
Length = 234
0 50 100 150 200
| | | | | |234
sptrembl|Q43385|Q4338 | __________________________________________________
Local hits (HSPs) | __________
Score = 246 (91.7 bits), Expect = 7.8e-21, P = 7.8e-21
Identities = 38/49 (77%), Positives = 46/49 (93%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRN+PVGG +R
Sbjct: 14 CPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSR 62
^ = sptrembl|Q9ZPY0|Q9ZPY0 PUTATIVE ZINC FINGER
PROTEIN.//:tremblnew|AC006418|AC006418_12 gene: "At2g46590";
product: "putative DOF zinc finger protein"; Arabidopsis thaliana
chromosome II section 247 of 255 of the complete sequence.
//:trembl|AC006418|AC006418_12 gene: "F13A10.12"; product:
"putative zinc finger protein"; Arabidopsis thaliana chromosome II
BAC F13A10 genomic sequence, complete sequence.
//:gp|AC006418|4415939 putative zinc finger protein [Arabidopsis
thaliana]//:gpnew|AC006418|4415939 putative DOF zinc finger protein
[Arabidopsis thaliana]
Length = 356
0 80 160 240 320
| | | | | |356
sptrembl|Q9ZPY0|Q9ZPY | __________________________________________________
Local hits (HSPs) | ______
Score = 246 (91.7 bits), Expect = 7.8e-21, P = 7.8e-21
Identities = 38/49 (77%), Positives = 46/49 (93%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRN+PVGG +R
Sbjct: 69 CPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSR 117
^ = sptremblnew|CAB40190|CAB40190 DNA-BINDING
PROTEIN.//:trembl|AJ224122|ATAJ4122_1 gene: "BBFa"; product:
"DNA-binding protein"; Arabidopsis thaliana BBFa gene
//:gp|AJ224122|4581965 DNA-binding protein [Arabidopsis thaliana]
Length = 296
0 60 120 180 240
| | | | | |296
sptremblnew|CAB40190| | __________________________________________________
Local hits (HSPs) | ________
Score = 246 (91.7 bits), Expect = 7.8e-21, P = 7.8e-21
Identities = 38/49 (77%), Positives = 46/49 (93%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRN+PVGG +R
Sbjct: 76 CPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSR 124
^ = sptrembl|Q9ZS77|Q9ZS77 DNA BINDING PROTEIN.//:trembl|AJ000991|HVBPBF_1 gene:
"BPBF"; product: "DNA binding protein"; Hordeum vulgare mRNA for
DNA binding protein BPBF //:gp|AJ000991|3777436 DNA binding protein
[Hordeum vulgare]
Length = 333
0 70 140 210 280
| | | | | |333
sptrembl|Q9ZS77|Q9ZS7 | __________________________________________________
Local hits (HSPs) | _______
Score = 244 (91.0 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 38/50 (76%), Positives = 45/50 (90%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
+CPRC S NTKFCYYNNY++SQPR+FCK CRRYWT GG+LRN+P+GGG R
Sbjct: 37 ECPRCKSGNTKFCYYNNYSMSQPRYFCKACRRYWTHGGSLRNVPIGGGCR 86
^ = sptremblnew|CAB45899|CAB45899 HYPOTHETICAL 26.1 KD
PROTEIN.//:trembl|AL080282|ATT13K14_20 gene: "T13K14.200"; product:
"putative protein"; Arabidopsis thaliana DNA chromosome 4, BAC
clone T13K14 (ESSA project) //:pironly|T10646|T10646 hypothetical
protein T13K14.200 - Arabidopsis thaliana//:gp|AL080282|5262794
putative protein [Arabidopsis thaliana]
Length = 232
0 50 100 150 200
| | | | | |232
sptremblnew|CAB45899| | __________________________________________________
Local hits (HSPs) | __________
Score = 239 (89.2 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 38/49 (77%), Positives = 43/49 (87%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
C RCDS NTKFCYYNNY+ QPR+FCKNCRRYWT GGALRN+P+GG +R
Sbjct: 27 CARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGGALRNVPIGGSSR 75
^ = sptremblnew|AAF24604|AAF24604 PUTATIVE H-PROTEIN PROMOTER BINDING
FACTOR.//:tremblnew|AC021046|AC021046_2 gene: "F24J1.2"; product:
"putative H-protein promoter binding factor"; Arabidopsis thaliana
chromosome I BAC F24J1 genomic sequence, complete sequence.
//:gpnew|AC021046|6692253 putative H-protein promoter binding
factor [Arabidopsis thaliana]
Length = 399
0 80 160 240 320
| | | | | |399
sptremblnew|AAF24604| | __________________________________________________
Local hits (HSPs) | ______
Score = 242 (90.2 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 36/49 (73%), Positives = 45/49 (91%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNYN++QPR+FC+NC+RYWT GG++RN+PVG G R
Sbjct: 134 CPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRR 182
^ = sptrembl|O23083|O23083 SIMILARITY TO DNA BINDING
PROTEIN.//:trembl|AF013294|ATAF13294_4 gene: "A_TM018A10.2";
Arabidopsis thaliana BAC TM018A10. //:pironly|T01552|T01552
hypothetical protein A_TM018A10.2 - Arabidopsis
thaliana//:gp|AF013294|2252850 contains region of similarity to DNA
binding protein [Arabidopsis thaliana]
Length = 575
0 120 240 360 480
| | | | | |575
sptrembl|O23083|O2308 | __________________________________________________
Local hits (HSPs) | ____
Score = 247 (92.0 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 38/49 (77%), Positives = 47/49 (95%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNY+L+QPR+ CK+CRRYWT+GG+LRN+PVGGG+R
Sbjct: 351 CPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSR 399
^ = sptrembl|O81601|O81601 H-PROTEIN PROMOTER BINDING
FACTOR-2B.//:trembl|AF079504|AF079504_1 product: "H-protein
promoter binding factor-2b"; Arabidopsis thaliana H-protein
promoter binding factor-2b mRNA, complete cds.
//:gp|AF079504|3386548 H-protein promoter binding factor-2b
[Arabidopsis thaliana]
Length = 400
0 80 160 240 320 400
| | | | | |400
sptrembl|O81601|O8160 | __________________________________________________
Local hits (HSPs) | ______
Score = 242 (90.2 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 36/49 (73%), Positives = 45/49 (91%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNYN++QPR+FC+NC+RYWT GG++RN+PVG G R
Sbjct: 135 CPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRR 183
^ = sptrembl|O49550|O49550 HYPOTHETICAL 28.1 KD
PROTEIN.//:trembl|AL021960|ATF7J7_2 gene: "F7J7.20"; product:
"putative protein"; Arabidopsis thaliana DNA chromosome 4, BAC
clone F7J7 (ESSA project) //:pironly|T04939|T04939 hypothetical
protein F7J7.20 - Arabidopsis thaliana//:gp|AL021960|2911065
putative protein [Arabidopsis thaliana]
Length = 249
0 50 100 150 200
| | | | | |249
sptrembl|O49550|O4955 | __________________________________________________
Local hits (HSPs) | _________
Score = 236 (88.1 bits), Expect = 8.9e-20, P = 8.9e-20
Identities = 39/49 (79%), Positives = 42/49 (85%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
C RCDS NTKFCYYNNY QPR+FCKNCRRYWT GGALRNIP+GG +R
Sbjct: 27 CARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGGSSR 75
^ = sptremblnew|BAA78574|BAA78574 DOF ZINC FINGER
PROTEIN.//:trembl|AB028131|AB028131_1 product: "Dof zinc finger
protein"; Oryza sativa mRNA for Dof zinc finger protein, complete
cds. //:gp|AB028131|4996644 Dof zinc finger protein [Oryza sativa]
Length = 371
0 80 160 240 320
| | | | | |371
sptremblnew|BAA78574| | __________________________________________________
Local hits (HSPs) | ______
Score = 237 (88.5 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 36/49 (73%), Positives = 45/49 (91%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S TKFCYYNNY+++QPR+FC+ CRRYWT+GG+LRN+PVGGG R
Sbjct: 47 CPRCNSIKTKFCYYNNYSMAQPRYFCRECRRYWTQGGSLRNVPVGGGCR 95
^ = sptrembl|O22967|O22967 DNA-BINDING PROTEIN
ISOLOG.//:tremblnew|AC002341|ATAC2341_17 gene: "At2g34140";
product: "putative DOF zinc finger protein"; Arabidopsis thaliana
chromosome II section 188 of 255 of the complete sequence.
//:trembl|AC002341|ATAC2341_17 gene: "T14G11.26"; product:
"DNA-binding protein isolog"; Arabidopsis thaliana chromosome II
BAC T14G11 genomic sequence, complete sequence.
//:gp|AC002341|2342734 DNA-binding protein isolog [Arabidopsis
thaliana]//:gpnew|AC002341|2342734 putative DOF zinc finger protein
[Arabidopsis thaliana]
Length = 170
0 40 80 120 160
| | | | | |170
sptrembl|O22967|O2296 | __________________________________________________
Local hits (HSPs) | ______________
Score = 235 (87.8 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 37/49 (75%), Positives = 41/49 (83%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC S TKFCY+NNYN++QPRHFCK C RYWT GGALRN+PVG G R
Sbjct: 60 CPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRR 108
^ = sptrembl|Q39540|Q39540 AOBP (ASCORBATE OXIDASE PROMOTER-BINDING
PROTEIN).//:trembl|D45066|CMAAOP_1 product: "AOBP (ascorbate
oxidase promoter-binding protein)"; Cucurbita maxima mRNA for AOBP
(ascorbate oxidase promoter-binding protein), complete cds.
//:pironly|T09661|T09661 ascorbate oxidase promoter-binding protein
AOBP - winter squash//:gp|D45066|1669341 AOBP (ascorbate oxidase
promoter-binding protein) [Cucurbita maxima]
Length = 380
0 80 160 240 320
| | | | | |380
sptrembl|Q39540|Q3954 | __________________________________________________
Local hits (HSPs) | ______
Score = 236 (88.1 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 36/49 (73%), Positives = 43/49 (87%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S TKFCYYNNYN++QPRHFCK C+RYWT+GG +RN+PVG G R
Sbjct: 42 CPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTEGGTIRNVPVGAGRR 90
^ = sptremblnew|BAA88190|BAA88190 SIMILAR TO H-PROTEIN PROMOTER BINDING
FACTOR-2A.//:tremblnew|AP000836|AP000836_22 Oryza sativa genomic
DNA, chromosome 1, clone:P0038F12. //:gp|AP000836|6539573 Similar
to H-protein promoter binding factor-2a (AF079503) [Oryza sativa]
Length = 454
0 90 180 270 360 450
| | | | | |454
sptremblnew|BAA88190| | __________________________________________________
Local hits (HSPs) | _____
Score = 237 (88.5 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 36/49 (73%), Positives = 43/49 (87%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S TKFCY+NNYN+ QPRHFC+NC+RYWT GGA+RN+PVG G R
Sbjct: 80 CPRCNSMETKFCYFNNYNVHQPRHFCRNCQRYWTAGGAMRNVPVGAGRR 128
^ = sptrembl|Q9ZSM2|Q9ZSM2 PUTATIVE DNA-BINDING PROTEIN
(FRAGMENT).//:trembl|AF100333|AF100333_1 gene: "ovg30"; product:
"putative DNA-binding protein"; Dendrobium grex Madame Thong-IN
putative DNA-binding protein (ovg30) mRNA, partial cds.
//:gp|AF100333|3929325 putative DNA-binding protein [Dendrobium
grex Madame Thong-IN]
Length = 179
0 40 80 120 160
| | | | | |179
sptrembl|Q9ZSM2|Q9ZSM | __________________________________________________
Local hits (HSPs) | ____________
Score = 228 (85.3 bits), Expect = 6.3e-19, P = 6.3e-19
Identities = 35/47 (74%), Positives = 43/47 (91%)
Query: 37 RCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
RC+S +TKFCYYNNYN++QPRHFCKNC+RYWT GG++RN+PVG G R
Sbjct: 31 RCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGSMRNVPVGAGRR 77
^ = sptremblnew|BAA78576|BAA78576 DOF ZINC FINGER
PROTEIN.//:trembl|AB028133|AB028133_1 product: "Dof zinc finger
protein"; Oryza sativa mRNA for Dof zinc finger protein, complete
cds. //:gp|AB028133|4996648 Dof zinc finger protein [Oryza sativa]
Length = 235
0 50 100 150 200
| | | | | |235
sptremblnew|BAA78576| | __________________________________________________
Local hits (HSPs) | ________
Score = 190 (71.9 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 30/43 (69%), Positives = 34/43 (79%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIP 77
CPRC S +TKFCY+NNYN++QPRHFCK C RYWT GGA P
Sbjct: 118 CPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGASATSP 160
^ = sptremblnew|CAB45898|CAB45898 HYPOTHETICAL 22.1 KD
PROTEIN.//:trembl|AL080282|ATT13K14_19 gene: "T13K14.190"; product:
"putative protein"; Arabidopsis thaliana DNA chromosome 4, BAC
clone T13K14 (ESSA project) //:pironly|T10645|T10645 hypothetical
protein T13K14.190 - Arabidopsis thaliana//:gp|AL080282|5262793
putative protein [Arabidopsis thaliana]
Length = 194
0 40 80 120 160
| | | | | |194
sptremblnew|CAB45898| | __________________________________________________
Local hits (HSPs) | ___________
Score = 170 (64.9 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 30/46 (65%), Positives = 33/46 (71%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGG 80
CPRC S T+F Y+NN SQPR+ CKNC R WT GG LRNIPV G
Sbjct: 23 CPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPVTG 68
^ = sptremblnew|CAB62470|CAB62470 DNA BINDING PROTEIN
(FRAGMENT).//:tremblnew|AL133363|ATT20E23_1 gene: "T20E23.10";
product: "DNA binding protein"; Arabidopsis thaliana DNA
chromosome 3, BAC clone T20E23 //:gpnew|AL133363|6561981 DNA
binding protein [Arabidopsis thaliana]
Length = 195
0 40 80 120 160
| | | | | |195
sptremblnew|CAB62470| | __________________________________________________
Local hits (HSPs) | ______
Score = 105 (42.0 bits), Expect = 0.00026, P = 0.00026
Identities = 17/21 (80%), Positives = 19/21 (90%)
Query: 63 CRRYWTKGGALRNIPVGGGTR 83
CRRYWT GG LR++PVGGGTR
Sbjct: 2 CRRYWTHGGTLRDVPVGGGTR 22
^ = sptremblnew|CAB49347|CAB49347 HYPOTHETICAL 16.3 KD
PROTEIN.//:trembl|AJ248284|CNSPAX02_127 product: "hypothetical
protein"; Pyrococcus abyssi complete genome; segment 2/6
//:pironly|D75158|D75158 hypothetical protein PAB2064 - Pyrococcus
abyssi (strain Orsay)//:gp|AJ248284|5457857 hypothetical protein
[Pyrococcus abyssi]
Length = 141
0 30 60 90 120
| | | | | |141
sptremblnew|CAB49347| | __________________________________________________
Local hits (HSPs) | ____________
Score = 72 (30.4 bits), Expect = 1.9, P = 0.85
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 35 CPRCDSPN-TKFCYY-NNYNLSQPRHFCKNCRRYWTK 69
CP C SPN K Y + N R+ CKNC R +T+
Sbjct: 36 CPYCKSPNIVKIGYIMRSGNFKIQRYKCKNCNRTFTE 72
WARNING: HSPs involving 36 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
matrix=BLOSUM62
E=100
V=100
B=50
hspmax=10
filter=seg
echofilter
stats
qtype
qres
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 194 194 1.0e+02 66 3 11 22 0.18 33
31 0.22 35
Statistics:
Query Expected Observed HSPs HSPs
Frame MatID High Score High Score Reportable Reported
+0 0 68 (30.9 bits) 898 (408.5 bits) 93 55
Query Neighborhd Word Excluded Failed Successful Overlaps
Frame MatID Words Hits Hits Extensions Extensions Excluded
+0 0 4992 52096637 12322235 39714973 59429 84
Database: /dove2/data/db/nrdb
Title: nrdb Release 31.Jan.2000
Release date: 31.Jan.2000
Posted date: 11:09:05 PM MET Jan 31, 2000
Format: BLAST-1.4
# of letters in database: 140,242,116
# of sequences in database: 454,538
# of database sequences satisfying E: 86
No. of states in DFA: 561 (110 KB)
Total size of DFA: 218 KB (256 KB)
Time to generate neighborhood: 0.01u 0.01s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 4
Search cpu time: 80.64u 9.45s 90.09t Elapsed: 00:00:36
Total cpu time: 80.70u 9.57s 90.27t Elapsed: 00:00:37
Start: Tue Feb 1 17:03:26 2000 End: Tue Feb 1 17:04:03 2000
WARNINGS ISSUED: 1
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